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Job Description | P07648 | Confidence | 82.60% | Date | Thu Jan 5 11:00:26 GMT 2012 |
Rank | 22 | Aligned Residues | 96 |
% Identity | 17% | Template | c2xzlA_ |
PDB info |
PDB header:hydrolase/rna | Chain: A: PDB Molecule:atp-dependent helicase nam7; |
PDBTitle: upf1-rna complex
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Resolution | 2.40 Å |
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638 | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | D | E | L | A | Q | R | L | D | Q | E | R | I | S | Q | R | F | L | A | G | P | V | N | I | C | T | L | M | P | M | R | S | I | P | F | K | V | V | C | L | L | G | M | N | D | G | V | Y | P | R | Q | L | A | P | L | G | F | D | L | M | S | Q | K | P | K | R | G | D | R | S | R | R | D | D | D | R | Y | L | F | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | A | Y | I | L | Q | Y | M | Q | M | N | G | S | L | D | K | D | L | Y | I | K | V | E | V | A | S | V | D | A | F | Q | G | R | E | K | D | Y | I | I | L | S | C | V | R | A | N | E | . |
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R | D | P | R | R | L | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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736 | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | |
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790 | . | . | . | . | . | . |
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718 | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | A | L | I | S | A | Q | Q | K | L | Y | I | S | Y | I | G | R | S | I | Q | D | N | S | E | R | F | P | S | V | L | V | Q | E | L | I | D | Y | I | G | Q | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | G | L | T | R | A | K | Y | G | L | V | I | . |
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L | G | . |
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N | P | R | S | L | A | R | N | T | L | W | N | H | L | L | I | H | F | R | E | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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797 | . | . | 800 | . | . | . | . | . | . | . | . | |
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. | 810 | |
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. | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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