Return to main results Retrieve Phyre Job Id

Job DescriptionP07648
Confidence9.03%DateThu Jan 5 11:00:26 GMT 2012
Rank65Aligned Residues43
% Identity23%Templatec1w5cT_
PDB info PDB header:photosynthesisChain: T: PDB Molecule:cytochrome c-550; PDBTitle: photosystem ii from thermosynechococcus elongatus
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   463......470........ .480.... .....490.........500 .....
Predicted Secondary structure 





...................

.

....




Query SS confidence 















. . . . . . . . . . . . . . . . . . .





.















. . . .




Query Sequence  SRFVSEDVLALLDVPV. . . . . . . . . . . . . . . . . . . LAARFD. ITEEGLRYLRQWVNES. . . . GIRWG
Query Conservation   
     

 

  
 ...................
   
 .
   

  
   
   ....




Alig confidence 















...................





.















....




Template Conservation         
                            

 
  





 

  

  

       
Template Sequence  PRDNIEGLVDYMKNPTTYDGEQEIAEVHPSLRSADIFPKMRNLTEKDLVAIAGHILVEPKILGDKWG
Template Known Secondary structure 

SSS
B
TTSSSB
TTTS

STTTTTSGGGTT

GGGGT
Template Predicted Secondary structure 










































Template SS confidence 


































































   65....70.........80.........90.........100.........110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions