Job Description P07648 Confidence 100.00% Date Thu Jan 5 11:00:26 GMT 2012 Rank 1 Aligned Residues 1077 % Identity 100% Template c1w36F_ PDB info PDB header:recombination Chain: F: PDB Molecule:exodeoxyribonuclease v gamma chain; PDBTitle: recbcd:dna complex Resolution 3.1 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	R	V	Y	H	S	N	R	L	D	V	L	E	A	L	M	E	F	I	V	E	R	E	R	L	D	D	P	F	E	P	E	M	I	L	V	Q	S	T	G	M	A	Q	W	L	Q	M	T	L	S	Q	K	F	G	I	A	A	N	I	D	F	P	L	P	A	S	F	I	W	D	M	F	V	R	V	L	P	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	R	V	Y	H	S	N	R	L	D	V	L	E	A	L	M	E	F	I	V	E	R	E	R	L	D	D	P	F	E	P	E	M	I	L	V	Q	S	T	G	M	A	Q	W	L	Q	M	T	L	S	Q	K	F	G	I	A	A	N	I	D	F	P	L	P	A	S	F	I	W	D	M	F	V	R	V	L	P	E	I
Template Known Secondary structure									S															S	S					S	S				B				S	S														T	T	S						B																S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	E	S	A	F	N	K	Q	S	M	S	W	K	L	M	T	L	L	P	Q	L	L	E	R	E	D	F	T	L	L	R	H	Y	L	T	D	D	S	D	K	R	K	L	F	Q	L	S	S	K	A	A	D	L	F	D	Q	Y	L	V	Y	R	P	D	W	L	A	Q	W	E	T	G	H	L	V	E	G	L	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	E	S	A	F	N	K	Q	S	M	S	W	K	L	M	T	L	L	P	Q	L	L	E	R	E	D	F	T	L	L	R	H	Y	L	T	D	D	S	D	K	R	K	L	F	Q	L	S	S	K	A	A	D	L	F	D	Q	Y	L	V	Y	R	P	D	W	L	A	Q	W	E	T	G	H	L	V	E	G	L	G	E
Template Known Secondary structure			S	S		T	T																		S	S	S	T	T							S	S	S	S		S	S																		T	T	S	S								T	T	T				T	T			T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	W	Q	A	P	L	W	K	A	L	V	E	Y	T	H	Q	L	G	Q	P	R	W	H	R	A	N	L	Y	Q	R	F	I	E	T	L	E	S	A	T	T	C	P	P	G	L	P	S	R	V	F	I	C	G	I	S	A	L	P	P	V	Y	L	Q	A	L	Q	A	L	G	K	H	I	E	I	H	L	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	A	W	Q	A	P	L	W	K	A	L	V	E	Y	T	H	Q	L	G	Q	P	R	W	H	R	A	N	L	Y	Q	R	F	I	E	T	L	E	S	A	T	T	C	P	P	G	L	P	S	R	V	F	I	C	G	I	S	A	L	P	P	V	Y	L	Q	A	L	Q	A	L	G	K	H	I	E	I	H	L	L	F
Template Known Secondary structure		T																		T	T						S													S		T	T				S			S						S																T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	P	C	R	Y	Y	W	G	D	I	K	D	P	A	Y	L	A	K	L	L	T	R	Q	R	R	H	S	F	E	D	R	E	L	P	L	F	R	D	S	E	N	A	G	Q	L	F	N	S	D	G	E	Q	D	V	G	N	P	L	L	A	S	W	G	K	L	G	R	D	Y	I	Y	L	L	S	D	L	E	S	S
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	P	C	R	Y	Y	W	G	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	P	L	L	A	S	W	G	K	L	G	R	D	Y	I	Y	L	L	S	D	L	E	S	S
Template Known Secondary structure				S		S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								T											T	T		S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.																																													.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	D	A	F	V	D	V	T	P	D	N	L	L	H	N	I	Q	S	D	I	L	E	L	E	N	R	A	V	A	G	V	N	I	E	E	F	S	R	S	D	N	K	R	P	L	D	P	L	D	S	S	I	T	F	H	V	C	H	S	P	Q	R	E	V	E	V	L	H	D	R	L	L	A	M	L	E	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	L	D	A	F	V	D	V	T	P	D	N	L	L	H	N	I	Q	S	D	I	L	E	L	E	N	R	A	V	A	G	V	N	I	E	E	F	S	R	S	D	N	K	R	P	L	D	P	L	D	S	S	I	T	F	H	V	C	H	S	P	Q	R	E	V	E	V	L	H	D	R	L	L	A	M	L	E	E	D
Template Known Secondary structure												S		S												T									S								T	T	S					T	T			S	S						S	S																			S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	L	T	P	R	D	I	I	V	M	V	A	D	I	D	S	Y	S	P	F	I	Q	A	V	F	G	S	A	P	A	D	R	Y	L	P	Y	A	I	S	D	R	R	A	R	Q	S	H	P	V	L	E	A	F	I	S	L	L	S	L	P	D	S	R	F	V	S	E	D	V	L	A	L	L	D	V	P	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	L	T	P	R	D	I	I	V	M	V	A	D	I	D	S	Y	S	P	F	I	Q	A	V	F	G	S	A	P	A	D	R	Y	L	P	Y	A	I	S	D	R	R	A	R	Q	S	H	P	V	L	E	A	F	I	S	L	L	S	L	P	D	S	R	F	V	S	E	D	V	L	A	L	L	D	V	P	V	L	A
Template Known Secondary structure		T	T			G	G	G						T	T												T	S			S	S	T	T								S			T	T	T	T											T	T	G	G	G												T	T	S
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	F	D	I	T	E	E	G	L	R	Y	L	R	Q	W	V	N	E	S	G	I	R	W	G	I	D	D	D	N	V	R	E	L	E	L	P	A	T	G	Q	H	T	W	R	F	G	L	T	R	M	L	L	G	Y	A	M	E	S	A	Q	G	E	W	Q	S	V	L	P	Y	D	E	S	S	G	L	I	A	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	F	D	I	T	E	E	G	L	R	Y	L	R	Q	W	V	N	E	S	G	I	R	W	G	I	D	D	D	N	V	R	E	L	E	L	P	A	T	G	Q	H	T	W	R	F	G	L	T	R	M	L	L	G	Y	A	M	E	S	A	Q	G	E	W	Q	S	V	L	P	Y	D	E	S	S	G	L	I	A	E	L
Template Known Secondary structure				T	T																	T			S		S								T	T					S	S	S	S													S	S		S	T	T			S	S	S					T	T	S		S	S	T
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	H	L	A	S	L	L	M	Q	L	N	I	W	R	R	G	L	A	Q	E	R	P	L	E	E	W	L	P	V	C	R	D	M	L	N	A	F	F	L	P	D	A	E	T	E	A	A	M	T	L	I	E	Q	Q	W	Q	A	I	I	A	E	G	L	G	A	Q	Y	G	D	A	V	P	L	S	L	L	R	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	H	L	A	S	L	L	M	Q	L	N	I	W	R	R	G	L	A	Q	E	R	P	L	E	E	W	L	P	V	C	R	D	M	L	N	A	F	F	L	P	D	A	E	T	E	A	A	M	T	L	I	E	Q	Q	W	Q	A	I	I	A	E	G	L	G	A	Q	Y	G	D	A	V	P	L	S	L	L	R	D	E
Template Known Secondary structure																			S	S	S								T	T														S																							T	T			S
Template Predicted Secondary structure
Template SS confidence
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	R	L	D	Q	E	R	I	S	Q	R	F	L	A	G	P	V	N	I	C	T	L	M	P	M	R	S	I	P	F	K	V	V	C	L	L	G	M	N	D	G	V	Y	P	R	Q	L	A	P	L	G	F	D	L	M	S	Q	K	P	K	R	G	D	R	S	R	R	D	D	D	R	Y	L	F	L	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	Q	R	L	D	Q	E	R	I	S	Q	R	F	L	A	G	P	V	N	I	C	T	L	M	P	M	R	S	I	P	F	K	V	V	C	L	L	G	M	N	D	G	V	Y	P	R	Q	L	A	P	L	G	F	D	L	M	S	Q	K	P	K	R	G	D	R	S	R	R	D	D	D	R	Y	L	F	L	E	A	L
Template Known Secondary structure													T	T	T	T	S	S	S								T	T														B	T	T	T	S	S							S	S						S			T	T
Template Predicted Secondary structure
Template SS confidence
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	Q	Q	K	L	Y	I	S	Y	I	G	R	S	I	Q	D	N	S	E	R	F	P	S	V	L	V	Q	E	L	I	D	Y	I	G	Q	S	H	Y	L	P	G	D	E	A	L	N	C	D	E	S	E	A	R	V	K	A	H	L	T	C	L	H	T	R	M	P	F	D	P	Q	N	Y	Q	P	G	E	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	A	Q	Q	K	L	Y	I	S	Y	I	G	R	S	I	Q	D	N	S	E	R	F	P	S	V	L	V	Q	E	L	I	D	Y	I	G	Q	S	H	Y	L	P	G	D	E	A	L	N	C	D	E	S	E	A	R	V	K	A	H	L	T	C	L	H	T	R	M	P	F	D	P	Q	N	Y	Q	P	G	E	R	Q
Template Known Secondary structure															B		S	S	S			B			B													T	T				S	S		S	S	S																			S	S	T	T	S	G	G	G	S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800
		801	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	A	R	E	W	L	P	A	A	S	Q	A	G	K	A	H	S	E	F	V	Q	P	L	P	F	T	L	P	E	T	V	P	L	E	T	L	Q	R	F	W	A	H	P	V	R	A	F	F	Q	M	R	L	Q	V	N	F	R	T	E	D	S	E	I	P	D	T	E	P	F	I	L	E	G	L	S	R	Y	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	A	R	E	W	L	P	A	A	S	Q	A	G	K	A	H	S	E	F	V	Q	P	L	P	F	T	L	P	E	T	V	P	L	E	T	L	Q	R	F	W	A	H	P	V	R	A	F	F	Q	M	R	L	Q	V	N	F	R	T	E	D	S	E	I	P	D	T	E	P	F	I	L	E	G	L	S	R	Y	Q	I
Template Known Secondary structure			S		G	G	G					T	T								S										S											S	S	S									T	S							S						S	S			S
Template Predicted Secondary structure
Template SS confidence
		801	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880
		881	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	Q	L	L	N	A	L	V	E	Q	D	D	A	E	R	L	F	R	R	F	R	A	A	G	D	L	P	Y	G	A	F	G	E	I	F	W	E	T	Q	C	Q	E	M	Q	Q	L	A	D	R	V	I	A	C	R	Q	P	G	Q	S	M	E	I	D	L	A	C	N	G	V	Q	I	T	G	W	L	P	Q	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	Q	L	L	N	A	L	V	E	Q	D	D	A	E	R	L	F	R	R	F	R	A	A	G	D	L	P	Y	G	A	F	G	E	I	F	W	E	T	Q	C	Q	E	M	Q	Q	L	A	D	R	V	I	A	C	R	Q	P	G	Q	S	M	E	I	D	L	A	C	N	G	V	Q	I	T	G	W	L	P	Q	V	Q
Template Known Secondary structure											T	T														T		S		S																								T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		881	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960
		961	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	G	L	L	R	W	R	P	S	L	L	S	V	A	Q	G	M	Q	L	W	L	E	H	L	V	Y	C	A	S	G	G	N	G	E	S	R	L	F	L	R	K	D	G	E	W	R	F	P	P	L	A	A	E	Q	A	L	H	Y	L	S	Q	L	I	E	G	Y	R	E	G	M	S	A	P	L	L	V	L	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	G	L	L	R	W	R	P	S	L	L	S	V	A	Q	G	M	Q	L	W	L	E	H	L	V	Y	C	A	S	G	G	N	G	E	S	R	L	F	L	R	K	D	G	E	W	R	F	P	P	L	A	A	E	Q	A	L	H	Y	L	S	Q	L	I	E	G	Y	R	E	G	M	S	A	P	L	L	V	L	P	E
Template Known Secondary structure		S	S							S	S																				T	S										G	G	G																											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		961	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040
		1041	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	G	A	W	L	K	T	C	Y	D	A	Q	N	D	A	M	L	D	D	D	S	T	L	Q	K	A	R	T	K	F	L	Q	A	Y	E	G	N	M	M	V	R	G	E	G	D	D	I	W	Y	Q	R	L	W	R	Q	L	T	P	E	T	M	E	A	I	V	E	Q	S	Q	R	F	L	L	P	L	F	R	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	G	A	W	L	K	T	C	Y	D	A	Q	N	D	A	M	L	D	D	D	S	T	L	Q	K	A	R	T	K	F	L	Q	A	Y	E	G	N	M	M	V	R	G	E	G	D	D	I	W	Y	Q	R	L	W	R	Q	L	T	P	E	T	M	E	A	I	V	E	Q	S	Q	R	F	L	L	P	L	F	R	F	N
Template Known Secondary structure													T	G	G	G																					S			S	S	S			T	T		S					T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		1041	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
		1121
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1121