Job Description P07648 Confidence 13.63% Date Thu Jan 5 11:00:26 GMT 2012 Rank 42 Aligned Residues 199 % Identity 12% Template c1eg4A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:dystrophin; PDBTitle: structure of a dystrophin ww domain fragment in complex2 with a beta-dystroglycan peptide Resolution 2.00 Å

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		431	.	.	.	.	.	.	.	.	440	.	.	.			.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		A	D	R	Y	L	P	Y	A	I	S	D	R	R	.	.	A	R	Q	S	H	P	V	L	E	A	F	I	S	L	L	S	L	P	D	S	R	F	V	S	E	D	V	L	A	L	L	D	V	P	V	L	A	A	R	F	D	I	T	E	E	G	L	R	Y	L	R	Q	W	V	N	E	S	G	I	R	W	G	I	D	D
Query Conservation															.	.
Alig confidence															.	.																	.
Template Conservation																																	.
Template Sequence		S	P	N	K	V	P	Y	Y	I	N	H	E	T	Q	T	T	C	W	D	H	P	K	M	T	E	L	Y	Q	S	L	A	.	D	L	N	N	V	R	F	S	A	Y	R	T	A	M	K	L	R	R	L	Q	K	A	L	C	L	D	L	L	S	L	S	A	A	C	D	A	L	D	Q	H	N	L	K	Q	N	D	Q	P
Template Known Secondary structure			T	T	S							T	T	T	T				S	S											G	G	.	G	G	T	T		S	S																T	T	G	G	G													T	T				T	T	S
Template Predicted Secondary structure																																	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.																					.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.		.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		D	N	V	R	E	L	E	L	P	A	T	G	Q	H	T	W	R	F	G	L	T	R	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	Y	A	M	E	S	A	Q	G	E	W	Q	S	V	L	P	Y	D	E	S	S	G	L	.	I	A	E	L	V	G	H	L	A	S	L
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence								.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		M	D	I	L	Q	I	.	.	.	.	.	.	.	.	.	.	I	N	C	L	T	T	I	Y	D	R	L	E	Q	E	H	N	N	L	V	N	V	P	L	C	V	D	M	C	L	N	W	L	L	N	V	Y	D	T	G	R	T	G	R	I	R	V	L	S	F	K	T	G	I	I	S	L	C	K	A	H	L	E	D	K
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.															S	S	S	S																				T	T			S														T	S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	Q	L	N	I	W	R	R	G	L	A	Q	E	R	P	L	E	E	W	L	P	V	C	R	D	M	L	N	A	F	F	L	P	D	A	E	T	E	A	A	M	T	L	I	E	Q	Q	W	Q	A	I	I	A	E	G	L	G	A	Q	Y	G	D	A	V	P	L	S	L	L	R	D	E	L	A	Q
Query Conservation
Alig confidence																																																										.	.	.
Template Conservation																																																										.	.	.
Template Sequence		Y	R	Y	L	F	K	Q	V	A	S	S	T	G	F	C	D	Q	R	R	L	G	L	L	L	H	D	S	I	Q	I	P	R	Q	L	G	E	V	A	S	F	G	G	S	N	I	E	P	S	V	R	S	C	F	Q	F	A	.	.	.	N	N	K	P	E	I	E	A	A	L	F	L	D	W	M	R	L
Template Known Secondary structure										S		T	T	S		B																			T	T		G	G	G	G	T		S													T	.	.	.	T	T		S		B											T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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