Return to main results Retrieve Phyre Job Id

Job DescriptionP65294
Confidence99.90%DateThu Jan 5 12:10:11 GMT 2012
Rank1Aligned Residues52
% Identity48%Templated2rb6a1
SCOP infoSm-like fold Sm-like ribonucleoproteins YgdI/YgdR-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70..
Predicted Secondary structure 























Query SS confidence 



















































Query Sequence  SSDYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQINRDDVSQIIER
Query Conservation 

 




 

  
 
 


  
  

 
 
 
  
    



 
 

 
 
Alig confidence 



















































Template Conservation 

 

  
 

  
 
 


  
  



 
 
  
   


 
 
 




Template Sequence  SSQYIXSTKDGKXITSDSKPKLDKTTGXYLYYDEDGREVXIKQEDVTQIIER
Template Known Secondary structure 


TTS
SS

TTTT
TTS
GGG
Template Predicted Secondary structure 




























Template SS confidence 



















































   25....30.........40.........50.........60.........70......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions