 |
Job Description | P21888 | Confidence | 21.62% | Date | Thu Jan 5 11:38:38 GMT 2012 |
Rank | 159 | Aligned Residues | 73 |
% Identity | 16% | Template | d3bula2 |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 2.30 |
|
 |
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | Y | D | L | C | H | I | G | H | G | R | T | F | V | A | F | D | V | V | A | R | Y | L | R | F | L | G | Y | K | L | K | Y | V | R | N | I | T | D | I | D | D | K | I | I | K | R | A | N | E | N | G | E | S | F | V | A | M | V | D | R | M | I | A | E | M | H | K | D | F | D | A | L | N | I | L | R | P | D | M |
Query Conservation |   |
|   |   |
|   |   |
|
|
|
|
|
|   |   |
|   |   |
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
| . | . | . | . | . | . |   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   | . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|   | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
T | V | K | G | D | V | H | . |
. |
. |
. |
. |
. |
D | I | G | K | N | I | V | G | V | V | L | Q | C | N | N | Y | E | I | V | D | . |
. |
. |
. |
. |
. |
L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | M | V | P | A | E | K | . |
. |
. |
. |
. |
. |
. |
. |
I | L | R | T | A | K | E | V | N | A | D | L | I | G | L |
Template Known Secondary structure |   |
 | B | T | T |
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  | . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . | . | S | S | B |
|  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
753 | . | . | . | . | . | . | |
|
|
|
|
|
760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
780 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . |
  |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | P | R | A | T | H | H | I | A | E | I | I | E | L | T | E | Q | L | I | A | K | G |
Query Conservation |   |
  |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
Template Sequence |   |
S | G | L | I | T | P | S | L | D | E | M | V | N | V | A | K | E | M | E | R | Q | G |
Template Known Secondary structure |   |
 |
|
| S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
804 | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|