Return to main results Retrieve Phyre Job Id

Job DescriptionP21888
Confidence96.90%DateThu Jan 5 11:38:38 GMT 2012
Rank80Aligned Residues99
% Identity19%Templated2d5ba1
SCOP infoAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   313......320.........330... ......340.........350.........360.........370.......
Predicted Secondary structure 





........






.......
Query SS confidence 




















. . . . . . . .











































. . . . . . .
Query Sequence  RAALERLYTALRGTDKTVAPA. . . . . . . . GGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAA. . . . . . .
Query Conservation       

              ........            
 

     

  
  
    
          .......
Alig confidence 




















........












.





























.......
Template Conservation 


  
      
   
 

                      .
      
   
       
 
     

   
    
Template Sequence  GNLVQRTRAMLFRFAEGRIPEPVAGEELAEGTGLAGRLRPLV. RELKFHVALEEAMAYVKALNRYINEKKPWELFKKEPE
Template Known Secondary structure  STTB






GGGGGGGG.TT


Template Predicted Secondary structure 









.




Template SS confidence 















































































   354.....360.........370.........380.........390..... ....400.........410.........420.........430..
 
   378.380.........390.........400.........410..
Predicted Secondary structure  ......















Query SS confidence  . . . . . .


































Query Sequence  . . . . . . NAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSE
Query Conservation  ......      
     


                    
Alig confidence  ......


































Template Conservation       
      
     

 
  
  

 
   

     
Template Sequence  EARAVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEEV
Template Known Secondary structure  TTTSTT

SS
Template Predicted Secondary structure 









Template SS confidence 








































   433......440.........450.........460.........470...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions