Job Description P21888 Confidence 100.00% Date Thu Jan 5 11:38:38 GMT 2012 Rank 12 Aligned Residues 291 % Identity 19% Template d1rqga2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.90

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		24	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure									.	.													.
Query SS confidence									.	.													.
Query Sequence		G	M	Y	V	C	G	I	.	.	T	V	Y	D	L	C	H	I	G	H	G	R	.	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E	M	H	K	D	F
Query Conservation									.	.													.
Alig confidence									.	.													.
Template Conservation
Template Sequence		R	Y	M	V	T	S	A	L	P	Y	A	N	G	P	I	H	A	G	H	L	A	G	A	Y	L	P	A	D	I	F	V	R	Y	L	R	L	K	G	E	D	V	V	F	I	C	G	T	D	E	H	G	T	P	I	S	F	R	A	L	K	E	G	R	S	P	R	E	I	V	D	E	F	H	E	Q	I	K	I	T	F
Template Known Secondary structure											B	T	T	S			B								T													T	T										B			S											T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																				150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	L	N	I	L	R	P	D	M	E	P	R	A	T	H	.	.	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	Y	G	V	L	S	R	Q	D
Query Conservation																		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.									.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		Q	R	A	K	I	S	F	.	D	F	F	G	R	T	E	L	P	I	H	Y	K	L	S	Q	E	F	F	L	K	A	Y	E	N	G	H	L	V	K	K	V	T	K	Q	A	Y	C	E	H	D	K	M	F	L	P	D	R	F	A	I	C	G	R	P	I	S	F	R	D	S	A	H	Y	Y	I	K	M	Q	D	F	A
Template Known Secondary structure					T				.	S					T	T	S																	T	T												B	T	T	T	T	B				T	T				S																G	G	G	T
Template Predicted Secondary structure									.
Template SS confidence
		83	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																																	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R	N	P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	H	I
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	L	K	R	W	I	E	K	Q	P	W	K	P	N	V	K	N	M	V	L	S	W	I	E	E	G	L	E	E	R	A	I	T	R	D	L	N	W	G	I	P	V	P	L	D	E	E	D	M	K	G	K	V	L	Y	V	W	F	E	A	P	I	G	Y	I	S	I	T	I	E	H	F	K	R	I	G	K	P	N
Template Known Secondary structure										S	S															T	T												S	S	S		B		S				S	S	S	T	T									G	G	G													T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.										.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.
Query Sequence		E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	.	.	.	.	.	.	.	.	.	D	G	Q	Y	V	N	Y	W	M	H	S	G	M	V	M	V	D	R	E	K	M	S	K	S	L	G	N	F	F	T	V	R
Query Conservation																																									.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	W	K	K	Y	W	L	N	I	D	G	Q	T	R	V	I	H	F	I	G	K	D	N	I	P	F	H	A	I	F	W	P	A	F	L	M	A	Y	G	K	Y	K	D	E	E	V	E	A	E	W	N	L	P	Y	D	I	P	A	N	E	Y	L	T	L	E	G	K	K	F	S	T	S	R	N	W	A	I	W	V	H
Template Known Secondary structure		T	T					B		S	S											G	G	G						T								T	T			B		S	S	S			B		B				S	B										T	T				B	T	T	T	T	B	S		B
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		D	V	L	K	Y	Y	D	A	E	T	V	R	Y	F	L	M	S	G	H	Y	.	R	S	Q	L	N	Y	S	E	E	N	L	K	Q	A	R	A	A
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		E	F	L	D	V	F	P	A	D	Y	L	R	Y	Y	L	T	T	I	M	P	E	T	R	D	S	D	F	S	F	S	D	F	K	V	R	I	N	E
Template Known Secondary structure				T	T	T	S												T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions