Job Description P21888 Confidence 97.92% Date Thu Jan 5 11:38:38 GMT 2012 Rank 75 Aligned Residues 202 % Identity 16% Template d1r6ta2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		H	A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	C	.	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E	M	H
Query Conservation																				.
Alig confidence											.									.											.	.	.																.	.				.	.	.	.	.														.
Template Conservation											.																				.	.	.																.	.				.	.	.	.	.														.
Template Sequence		N	K	K	P	F	Y	L	Y	T	.	G	R	G	P	S	S	E	A	X	H	V	G	H	L	I	P	F	I	F	.	.	.	T	K	W	L	Q	D	V	F	N	V	P	L	V	I	Q	.	.	X	T	D	.	.	.	.	.	D	E	K	Y	L	W	K	D	L	T	L	D	Q	.	A	Y	G	D	A	V	E	N	A
Template Known Secondary structure		T	T								.						T	T			B	G	G	G							.	.	.									T							.	.				.	.	.	.	.							S	S						.
Template Predicted Secondary structure											.																				.	.	.																.	.				.	.	.	.	.														.
Template SS confidence
		152	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	F	D	A	L	N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R	N
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	I	I	A	C	G	F	D	I	N	K	T	F	I	F	S	D	L	D	Y	X	G	X	S	S	G	F	Y	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	K	I	Q	K	H	V	T	F	N	Q	V	K	G	I	F	G	F	T	D	S	D	C	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T				T	T	S										G	G	G		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.							T														T	T	S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250															.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.												.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	.	.	.	.	.	.	.	.	.	.	.	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	I	S	F	P	A	I	Q	A	A	P	S	F	S	N	S	F	P	Q	I	F	R	D	R	T	D	I	Q	C	L	I	P	C	A	I	D	Q	D	P	.	Y	F	R	X	T	R	D	V	A	P	R	I	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											G	G	G	S	G	G	G						T	T												G	G	G			.									G	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
																												276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.			.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																	.				.	.								.
Query SS confidence																	.				.	.								.
Query Sequence		D	G	Q	Y	V	N	Y	W	M	H	S	G	M	V	M	.	V	D	R	.	.	E	K	M	S	K	S	L	.	G	N	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R
Query Conservation																	.				.	.								.
Alig confidence						.	.										.				.	.								.									.	.	.	.	.
Template Conservation						.	.																																.	.	.	.	.
Template Sequence		Y	P	K	P	.	.	A	L	L	H	S	T	F	F	P	A	L	Q	G	A	Q	T	K	X	S	A	S	D	P	N	S	S	I	F	L	T	D	.	.	.	.	.	T	A	K	Q	I	K
Template Known Secondary structure						.	.											T	T								T	T	S	T	T				B	T	T		.	.	.	.	.
Template Predicted Secondary structure						.	.																																.	.	.	.	.
Template SS confidence
		329	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.						.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions