Job Description P21888 Confidence 98.68% Date Thu Jan 5 11:38:38 GMT 2012 Rank 56 Aligned Residues 290 % Identity 17% Template c3prhB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase val144pro mutant from b. subtilis Resolution 2.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	Y	V	C	G	I	T	V	Y	D	L	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E	M	H	K	D	F	D	A	L
Query Conservation
Alig confidence																									.	.	.								.								.	.						.	.	.	.	.	.											.
Template Conservation																									.	.	.								.								.	.						.	.	.	.	.	.											.
Template Sequence		Q	T	I	F	S	G	I	Q	P	S	G	S	V	T	L	G	N	Y	I	G	A	M	K	.	.	.	Q	F	V	E	L	Q	H	.	D	Y	N	S	Y	F	C	.	.	I	V	D	Q	H	.	.	.	.	.	.	A	I	T	V	P	Q	D	R	L	E	.	L	R	K	N	I	R	N	L	A	A	L	Y	L	A	V
Template Known Secondary structure												S			B							T			.	.	.					T	T	T	.	T	S						.	.						.	.	.	.	.	.		T	T	S							.															T
Template Predicted Secondary structure																									.	.	.								.								.	.						.	.	.	.	.	.											.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.		.	.	.	.	.	.	.			40	.	.	.	.							.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R	N	P	M	D	F	V	L
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	D	P	E	K	A	T	L	F	I	Q	S	E	V	P	A	H	A	Q	A	G	W	M	M	Q	C	V	A	Y	I	G	E	L	E	R	M	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T			T	T	T	S					G	G	G		T											T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.						.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	.	.	.	.	.	Q	Y	V	N	Y	W	M	H	S	G
Query Conservation																																																																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	L	T	Y	P	P	L	M	A	A	D	I	L	L	Y	G	T	D	L	V	P	P	G	E	D	Q	K	Q	.	H	L	E	L	T	R	N	L	A	E	R	F	N	K	K	Y	N	D	I	F	T	I	P	E	V	K	I	A	R	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T											T	T	T								T	T				.																T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
																						122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		259	260	.	.	.	.	.		.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.					.	.	.	.	.	.
Predicted Secondary structure									.									.	.	.																							.	.																												.	.	.	.
Query SS confidence									.									.	.	.																							.	.																												.	.	.	.
Query Sequence		M	V	M	V	D	R	E	.	K	M	S	K	S	L	G	N	.	.	.	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R	Y	F	L	M	S	.	.	G	H	Y	R	S	Q	L	N	Y	S	E	E	N	L	K	Q	A	R	A	A	L	E	R	L	Y	T	A	.	.	.	.	L	R	G	T	D	K
Query Conservation									.									.	.	.																							.	.																												.	.	.	.
Alig confidence									.									.	.	.							.	.	.	.	.												.	.																												.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		M	S	L	N	D	P	L	K	K	M	S	K	S	D	P	N	Q	K	A	Y	I	T	L	L	D	.	.	.	.	.	E	P	K	Q	L	E	K	K	I	K	S	A	V	T	D	S	E	G	I	V	K	F	D	K	E	N	K	P	G	V	S	N	L	L	T	I	Y	S	I	L	G	N	T	T	I	E	E	L	E	A
Template Known Secondary structure		B		S	S		T	T	S	B			T	T		S	S	T	T	S			B	T	T		.	.	.	.	.											T	S				S	S							T	T	T	S															T	S
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		T	V	A	P	A	G	G	E	A	F	E	A	R	F	I	E	A	M	D	D	D	F	N	T	P	E	A	Y	S	V	L	F	D	M	A	R	E	V	N	R	L	K	A	E	D	M	A	A	A	N	A	M	A	S	H	.	L	R	K	L	S	A	V	L	G	L
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		K	Y	E	G	K	G	Y	G	E	F	K	G	D	L	A	E	V	V	V	N	A	L	K	P	I	Q	D	R	Y	Y	E	L	I	E	S	E	E	L	D	R	I	L	D	E	G	A	E	R	A	N	R	T	A	N	K	M	L	K	K	M	E	N	A	M	G	L
Template Known Secondary structure			T	T	T																															S	S																													T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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