Job Description P21888 Confidence 98.26% Date Thu Jan 5 11:38:38 GMT 2012 Rank 69 Aligned Residues 208 % Identity 13% Template c3p0jD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: leishmania major tyrosyl-trna synthetase in complex with tyrosinol,2 triclinic crystal form 1 Resolution 2.89 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E	M	H	K	D
Query Conservation
Alig confidence										.													.	.	.																						.	.	.	.	.																			.
Template Conservation										.													.	.	.																						.	.	.	.	.																			.
Template Sequence		K	P	L	I	R	C	Y	D	.	G	F	E	P	S	G	R	M	H	I	A	Q	.	.	.	G	I	F	K	A	V	N	V	N	K	C	T	A	A	G	C	E	F	V	F	W	.	.	.	.	.	V	A	D	W	F	A	L	M	N	D	K	V	G	G	E	L	E	K	.	I	R	I	V	G	R	Y	L	I	E	V
Template Known Secondary structure			S	S						.						S	S		B				.	.	.															T							.	.	.	.	.										T		S	T	T					.
Template Predicted Secondary structure										.													.	.	.																						.	.	.	.	.																			.
Template SS confidence
		30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure											.													.
Query SS confidence											.													.
Query Sequence		F	D	A	L	N	I	L	R	P	.	D	M	E	P	R	A	T	H	H	I	A	E	.	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R	N
Query Conservation											.													.
Alig confidence											.													.												.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Sequence		W	K	A	A	G	M	D	M	D	K	V	L	F	L	W	S	S	E	E	I	T	S	H	A	D	T	Y	W	R	M	V	L	D	I	.	.	.	.	.	.	.	.	.	G	R	Q	N	T	I	A	R	I	K	K	C	C	T	I	M	G	K	T	E	G	T	L	T	A	A	Q	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T			G	G	G												T	T												.	.	.	.	.	.	.	.	.			T	S							T	T					T	S			S	S			S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	Q	Y	V	N	Y	W	M	H	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	Y	P	L	M	Q	C	C	D	I	F	F	L	K	A	D	I	C	Q	L	G	L	D	Q	R	K	.	V	N	M	L	A	R	E	Y	C	D	L	I	G	R	K	L	K	P	V	I	L	S	H	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S													T	T		S					B	G	G	G			.													T										B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
																														161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		258	.	260	.	.	.	.			.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure									.	.							.
Query SS confidence									.	.							.
Query Sequence		G	M	V	M	V	D	R	.	.	E	K	M	S	K	S	.	L	G	N	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R
Query Conservation									.	.							.
Alig confidence									.	.							.										.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		M	L	A	G	L	K	Q	G	Q	A	K	M	S	K	S	D	P	D	S	A	I	F	M	E	D	.	.	.	.	.	T	E	E	D	V	A
Template Known Secondary structure						S	S	T	T		S	S			S	S		G	G	G	S		B	T	T		.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions