Job Description P21888 Confidence 97.99% Date Thu Jan 5 11:38:38 GMT 2012 Rank 74 Aligned Residues 201 % Identity 16% Template c3n9iA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from yersinia pestis2 co92 Resolution 1.95 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E	M	H	K	D	F	D
Query Conservation
Alig confidence							.														.	.	.														.								.	.						.	.	.	.	.	.														.
Template Conservation							.														.	.	.														.								.	.						.	.	.	.	.	.														.
Template Sequence		K	P	I	V	F	.	S	G	A	Q	P	S	G	E	L	T	I	G	N	.	.	.	Y	M	G	A	L	R	Q	W	V	Q	M	Q	D	.	D	Y	D	C	I	Y	C	.	.	I	V	D	L	H	.	.	.	.	.	.	A	I	T	A	R	Q	D	P	A	L	L	R	K	.	R	T	L	D	T	L	A	L	Y	L
Template Known Secondary structure							.					S		S			B				.	.	.				T						T	T	T	T	.	T	S						.	.						.	.	.	.	.	.		T	T	S										.
Template Predicted Secondary structure							.														.	.	.														.								.	.						.	.	.	.	.	.														.
Template SS confidence
		15	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.			.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R	N	P	M	D	F
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	C	G	I	D	P	K	K	S	T	I	F	V	Q	S	H	V	P	E	H	S	Q	L	S	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T			T	T	T	S					G	G	G		T											T	T	S							T											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.								.	.	250	.	.	.
Predicted Secondary structure																								.																																													.	.	.	.	.	.	.
Query SS confidence																								.																																													.	.	.	.	.	.	.
Query Sequence		V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	.	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	.	.	.	.	.	.	.	G	Q	Y	V	N	Y
Query Conservation																								.																																													.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.																												.																	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	Q	V	P	V	G	E	D	Q	.	K	Q	H	L	E	L	S	R	D	I	A	S	R	F	N	N	L	Y	G	D	I	F	K	I	P	E	P	F	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G																		T	T	T		S						G	G	G	.																			S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
																			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		254	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure									.	.	.											.	.	.
Query SS confidence									.	.	.											.	.	.
Query Sequence		W	M	H	S	G	M	V	.	.	.	M	V	D	R	E	K	M	S	K	S	.	.	.	L	G	N	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R
Query Conservation									.	.	.											.	.	.
Alig confidence									.	.	.											.	.	.										.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		P	K	A	G	A	R	V	M	S	L	Q	D	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	E	L	L	E	.	.	.	.	.	D	P	K	S	V	V
Template Known Secondary structure									B		S	S		T	T	S	B			T	T		S		G	G	G			B	T	T	S	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions