Job Description P21888 Confidence 99.85% Date Thu Jan 5 11:38:38 GMT 2012 Rank 44 Aligned Residues 265 % Identity 17% Template c3aiiA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: archaeal non-discriminating glutamyl-trna synthetase from2 methanothermobacter thermautotrophicus Resolution 1.65 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	K	P	I	H	A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I
Query Conservation
Alig confidence																.	.																									.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.																									.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	A	G	V	K	G	E	V	V	L	R	F	A	.	.	P	N	P	S	G	P	L	H	I	G	H	A	R	A	A	I	L	N	H	E	Y	A	R	K	.	.	.	.	.	Y	D	G	R	L	I	L	R	I	E	D	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	R	V	D	P	E	A	Y
Template Known Secondary structure				S	S			S								.	.			S	S	S	S		B																	.	.	.	.	.	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G			T	T
Template Predicted Secondary structure																.	.																									.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.														140	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	M	H	K	D	F	D	A	L	N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																													.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																													.	.	.	.	.
Template Sequence		D	M	I	P	A	D	L	E	W	L	G	V	E	W	.	D	E	T	V	I	Q	S	D	R	M	E	T	Y	Y	E	Y	T	E	K	L	I	E	R	G	G	A	Y	V	.	.	.	.	.	C	T	C	R	P	E	E	F	R	E	L	K	N	R	G	E	A	C	H	C	R	S	L	G	F	R	E	N	L	Q	R	W
Template Known Secondary structure												T				.	S					G	G	G	G														T	T	S				.	.	.	.	.			S											T	T				G	G	G	G
Template Predicted Secondary structure																.																													.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
			154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R	N	P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	I	H	G	G	G	S	D	L	M	F
Query Conservation		.
Alig confidence		.																																														.												.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.												.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	M	F	E	M	K	E	G	S	A	V	V	R	V	K	T	D	L	N	H	P	N	P	A	I	R	D	W	V	S	M	R	I	V	E	A	E	H	P	R	T	G	T	R	Y	.	R	V	Y	P	M	M	N	F	S	V	A	.	.	.	.	.	.	.	.	.	.	V	D	D	H	L	L	G	V	T	H	V	L
Template Known Secondary structure				G	G	G	S		T	T	S									T	T		S	S	G	G	G	T	T									S		B	T	T	T	B	T	S		.												.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.											280	.	.	.	.	.	.	.	.	.	290	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.									.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.							.																		.
Query SS confidence																																														.	.	.	.	.	.	.	.							.																		.
Query Sequence		P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	Q	Y	V	N	Y	W	M	H	S	G	M	V	M	V	D	R	E	K	M	S	K	S	L	G	N	F	F	T	.	.	.	.	.	.	.	.	V	R	D	V	L	K	.	Y	Y	D	A	E	T	V	R	Y	F	L	M	S	G	H	Y	R	.	S	Q	L
Query Conservation																																														.	.	.	.	.	.	.	.							.																		.
Alig confidence																					.																									.	.	.	.	.	.	.	.							.																		.
Template Conservation																					.
Template Sequence		R	A	N	R	E	K	Q	E	Y	L	Y	R	H	L	G	W	E	P	P	.	E	F	I	H	Y	G	R	L	K	T	S	G	A	R	E	G	I	L	R	G	E	Y	S	G	W	D	D	P	R	L	G	T	L	R	A	I	A	R	R	G	I	R	P	E	A	I	R	K	L	M	V	E	I	G	V	K	I	A	D	S
Template Known Secondary structure																T					.								B												S	S			S	T	T		T	T	S		B							T	T														T	T		S	S		B
Template Predicted Secondary structure																					.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		303	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	S	E	E	N	L	K	Q	A	R	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	M	S	W	K	K	I	Y	G	L	N	R	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions