Job Description P21888 Confidence 26.51% Date Thu Jan 5 11:38:38 GMT 2012 Rank 139 Aligned Residues 67 % Identity 21% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		L	T	R	Q	K	E	E	F	K	P	I	H	A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	.	.	.	.	.	D	K	I	I	K	R	A	N	E	N	G
Query Conservation																																																																		.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.												.															.	.						.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.												.															.	.
Template Sequence		L	G	E	E	A	K	K	L	E	L	N	P	K	K	Q	N	V	I	L	L	V	G	I	Q	.	.	.	.	.	.	.	G	S	G	K	T	T	T	A	A	K	L	.	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	.	.	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H
Template Known Secondary structure					S								S	S	S										S	.	.	.	.	.	.	.	S	S	S	T	T							.															.	.			S				T	T	G	G	G	S	S							S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.												.															.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		83	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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