Job Description P21888 Confidence 98.08% Date Thu Jan 5 11:38:38 GMT 2012 Rank 72 Aligned Residues 206 % Identity 17% Template c2ts1A_ PDB info PDB header:ligase (synthetase) Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of tyrosyl-t/rna synthetase refined at 2.3 angstroms2 resolution. interaction of the enzyme with the tyrosyl adenylate3 intermediate Resolution 2.30 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																		.																															.	.	.	.	.
Query SS confidence																		.																															.	.	.	.	.
Query Sequence		A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	.	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	.	.	.	.	.	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I
Query Conservation																		.																															.	.	.	.	.
Alig confidence									.									.											.	.	.	.																	.	.	.	.	.
Template Conservation									.																				.	.	.	.
Template Sequence		E	E	R	V	T	L	Y	.	C	G	F	D	P	T	A	D	S	L	H	I	G	H	L	A	T	I	L	.	.	.	.	T	M	R	R	F	Q	Q	A	G	H	R	P	I	A	L	V	G	G	A	T	G	L	I	G	D	P	S	G	K	K	S	E	R	T	L	N	A	K	E	T	V	E	A	W	S	A	R	I	K
Template Known Secondary structure			S						.						S	S	S	S		B	G	G	G						.	.	.	.								T	T									T	T	G	G	G	T				T	T		S	S
Template Predicted Secondary structure									.																				.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	M	H	K	D	F	D	A	L	N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D
Query Conservation
Alig confidence									.																															.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation									.																															.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	L	G	R	F	L	.	D	F	E	A	D	G	N	P	A	K	I	K	N	N	Y	D	W	I	G	P	L	D	V	I	T	F	L	R	D	V	.	.	.	.	.	.	.	.	.	G	K	H	F	S	V	N	Y	M	M	A	K	E	S	V	Q	S	R	I	E	T	G	I	S	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	S	S	.		S	S		S	S	S							T					T	T										T	.	.	.	.	.	.	.	.	.	G	G	G								T	S					T	T	T	T	T				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.																															.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		D	K	R	N	P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	.	.	.	.	N	H	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	Q
Query Conservation																																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	E	F	S	Y	M	M	L	Q	A	Y	D	F	L	R	L	Y	E	T	E	G	C	R	L	Q	I	G	G	S	D	Q	.	W	G	N	I	T	A	G	L	E	L	I	R	K	T	K	G	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														G	G	G	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
																															164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Y	V	N	Y	W	M	H	S	G	M	V	M	.	V	D	R	E	K	M	S	K	S	L	G	N	F	F	T	V	R	D	V	L	K
Query Conservation														.
Alig confidence				.	.	.								.
Template Conservation				.	.	.
Template Sequence		F	G	.	.	.	L	T	I	P	L	V	T	K	A	D	G	T	K	F	G	K	T	E	S	G	T	I	W	L	D	K	E	K	T
Template Known Secondary structure				.	.	.									T	T	S			T	T			S	S				B	S	S	T	T	T	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		216	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions