Job Description P21888 Confidence 98.31% Date Thu Jan 5 11:38:38 GMT 2012 Rank 66 Aligned Residues 200 % Identity 18% Template c2quiB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structures of human tryptophanyl-trna synthetase in2 complex with tryptophanamide and atp Resolution 2.40 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		H	A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	.	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E	M	H
Query Conservation																			.
Alig confidence											.								.												.	.	.																.	.				.	.	.	.	.														.
Template Conservation											.																				.	.	.																.	.				.	.	.	.	.														.
Template Sequence		N	K	K	P	F	Y	L	Y	T	.	G	R	G	P	S	S	E	A	M	H	V	G	H	L	I	P	F	I	F	.	.	.	T	K	W	L	Q	D	V	F	N	V	P	L	V	I	Q	.	.	M	T	D	.	.	.	.	.	D	E	K	Y	L	W	K	D	L	T	L	D	Q	.	A	Y	S	Y	A	V	E	N	A
Template Known Secondary structure		T	T								.							S			B										.	.	.									T							.	.				.	.	.	.	.							S	S						.
Template Predicted Secondary structure											.																				.	.	.																.	.				.	.	.	.	.														.
Template SS confidence
		152	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		K	D	F	D	A	L	N	I	L	R	P	.	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R
Query Conservation													.
Alig confidence													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	I	I	A	C	G	F	D	I	N	K	T	F	I	F	S	D	L	D	Y	M	G	M	S	S	G	F	Y	K	N	V	V	K	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T				T	T	T											T	T		S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.												.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																													.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	.	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	.	.	.	.	.	.	.	.	.	.	.	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C
Query Conservation																													.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																				.																				.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.																																																													.
Template Sequence		.	.	.	.	.	.	.	.	K	H	V	T	F	N	Q	V	K	G	I	F	G	F	T	D	S	D	C	I	G	K	I	S	F	P	A	I	Q	A	A	P	S	F	S	N	S	F	P	Q	I	F	R	D	R	T	D	I	Q	C	L	I	P	C	A	I	D	Q	D	P	.	Y	F	R	M	T	R	D	V	A	P	R
Template Known Secondary structure		.	.	.	.	.	.	.	.		T														T	T	S													G	G	G	S	G	G	G						T	T		S										G	G	G			.									T	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																													.
Template SS confidence
										256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.			.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																			.				.	.										.
Query SS confidence																			.				.	.										.
Query Sequence		A	H	D	G	Q	Y	V	N	Y	W	M	H	S	G	M	V	M	.	V	D	R	.	.	E	K	M	S	K	S	L	G	N	.	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R
Query Conservation																			.				.	.										.
Alig confidence								.	.										.				.	.										.							.	.	.	.	.
Template Conservation								.	.																																.	.	.	.	.
Template Sequence		I	G	Y	P	K	P	.	.	A	L	L	H	S	T	F	F	P	A	L	Q	G	A	Q	T	K	M	S	A	S	D	P	N	S	S	I	F	L	T	D	.	.	.	.	.	T	A	K	Q	I	K
Template Known Secondary structure		G	T					.	.										B	T	T	B	S	S	S				S	S	S	T	T	S	S		B	T	T		.	.	.	.	.
Template Predicted Secondary structure								.	.																																.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.						.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions