Job Description P21888 Confidence 98.26% Date Thu Jan 5 11:38:38 GMT 2012 Rank 70 Aligned Residues 212 % Identity 14% Template c2janD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from mycobacterium tuberculosis in2 unliganded state Resolution 2.9 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		H	A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	.	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E	M	H
Query Conservation																			.
Alig confidence											.								.												.	.	.	.																	.	.	.	.		.	.	.	.	.	.
Template Conservation											.																				.	.	.	.																	.	.	.	.		.	.	.	.	.	.
Template Sequence		Q	R	G	P	M	T	V	Y	A	.	G	F	D	P	T	A	P	S	L	H	A	G	H	L	V	P	L	L	T	.	.	.	.	L	R	R	F	Q	R	A	G	H	R	P	I	V	L	A	G	.	.	.	.	G	.	.	.	.	.	.	A	T	G	M	I	G	D	T	V	A	E	W	T	E	R	I	R	G	Q	L
Template Known Secondary structure				S							.				T	T	S	S	S		B	G	G	G							.	.	.	.							T	T									.	.	.	.		.	.	.	.	.	.
Template Predicted Secondary structure											.																				.	.	.	.																	.	.	.	.		.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	F	D	A	L	N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R	N
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	F	V	D	F	D	D	S	P	M	G	A	I	V	E	N	N	L	E	W	T	G	S	L	S	A	I	E	F	L	R	D	I	G	K	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S				S	S	T	T							T					T	T										T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																												.																	.	.	.	.
Query SS confidence																												.																	.	.	.	.
Query Sequence		P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	.	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	.	.	.	.	H	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	Q	Y	V	N
Query Conservation																												.																	.	.	.	.
Alig confidence		.	.	.																		.						.																	.	.	.	.												.																				.	.
Template Conservation		.	.	.																		.																																						.																				.	.
Template Sequence		.	.	.	F	S	V	N	V	M	L	A	R	D	T	I	R	R	R	L	A	.	G	E	G	I	S	Y	T	E	F	S	Y	L	L	L	Q	A	N	D	Y	V	E	L	H	R	R	H	G	C	T	L	Q	I	G	G	A	D	Q	.	W	G	N	I	I	A	G	V	R	L	V	R	Q	K	L	G	A	T	V	.	.
Template Known Secondary structure		.	.	.								S	S									.	T	T																																	G	G	G	.																				.	.
Template Predicted Secondary structure		.	.	.																		.																																						.																				.	.
Template SS confidence
					144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure											.										.
Query SS confidence											.										.
Query Sequence		Y	W	M	H	S	G	M	V	M	.	V	D	R	E	K	M	S	K	S	.	L	G	N	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R	Y	F	L	M	S	G	H
Query Conservation											.										.
Alig confidence											.										.										.	.
Template Conservation																															.	.
Template Sequence		H	A	L	T	V	P	L	V	T	A	A	D	G	T	K	F	G	K	S	T	G	G	G	S	L	W	L	D	P	.	.	Q	M	T	S	P	Y	A	W	Y	Q	Y	F	V	N	T	A
Template Known Secondary structure										B		T	T	S		B	T	T	B		T	T	S		B		B	S	S	T	.	.	T	T	S											T
Template Predicted Secondary structure																															.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions