Job Description P21888 Confidence 29.26% Date Thu Jan 5 11:38:38 GMT 2012 Rank 131 Aligned Residues 72 % Identity 13% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		I	F	N	T	L	T	R	Q	K	E	E	F	K	P	I	H	A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	.	.	.	.	.	D	K	I	I	K	R	A
Query Conservation																																																																						.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.																											.	.						.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.																											.	.
Template Sequence		L	V	A	A	M	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	.	.	.	.	.	.	.	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	.	.	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A
Template Known Secondary structure						T	T		S						S		S	S	S	S								S	S	.	.	.	.	.	.	.	S	S	S	S	T	T	T										T	S	S	S					B		.	.					S	S	S		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.																											.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		79	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	N	G	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	V	G	V	D
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions