Job Description P21888 Confidence 99.94% Date Thu Jan 5 11:38:38 GMT 2012 Rank 41 Aligned Residues 268 % Identity 16% Template c2hz7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of the glutaminyl-trna synthetase from2 deinococcus radiodurans Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E	M	H
Query Conservation
Alig confidence												.	.																									.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																									.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	P	R	V	V	T	R	F	P	.	.	P	D	P	S	G	Y	A	H	L	G	H	V	F	A	S	L	L	D	F	N	T	A	R	Q	.	.	.	.	.	Y	G	G	Q	F	N	L	R	M	D	D	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	L	A	R	Q	E	Y	V	D	S	I	A
Template Known Secondary structure		S		S	S							.	.			S	S	S			B																	.	.	.	.	.	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure												.	.																									.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110														.	.	.	.	.	.	.	.	.	120	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.														150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		K	D	F	D	A	L	N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	Y	G	V	L	S	R	Q	D	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence																																										.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		D	D	L	K	W	L	G	L	D	W	G	E	H	F	Y	Y	A	S	D	Y	F	D	R	Y	Y	A	Y	A	E	Q	L	I	R	Q	G	D	A	Y	V	E	.	.	.	.	.	S	V	S	P	E	E	L	S	R	L	R	G	N	A	T	T	P	G	T	P	S	P	Y	R	D	R	S	V	E	E	N	L	D	L	L
Template Known Secondary structure								T				T	T					G	G	G	G														T	T	S					.	.	.	.	.		S											B	T	T	B						T	T	T	T
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R	N	P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	I	H	G	G	G	S	D	L
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																								.													.	.	.
Template Conservation																																																		.													.	.	.
Template Sequence		R	R	M	K	A	G	E	F	A	D	G	E	H	V	L	R	A	K	I	D	L	T	A	P	N	M	K	L	R	D	P	V	L	Y	R	I	V	N	K	P	H	F	R	T	S	D	E	W	.	H	I	Y	P	A	Y	D	F	E	H	P	L	.	.	.	Q	D	A	I	E	G	V	T	H	S	M	C	S	L	E	F
Template Known Secondary structure						T	T		S		T	T	S									T	T		S	S	G	G	G	S	S											B	T	T	T	B	T	S		.	S												.	.	.						T		S						G	G	G
Template Predicted Secondary structure																																																		.													.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.																.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	Q	Y	V	N	Y	W	M	H	S	G	M	V	M	V	D	R	E	K	M	S	K	S	L	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	T	V	R	D	V	L	K	.	Y	Y	D	A	E	T	V	R	Y	F	L	M
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence				.																			.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation				.																			.
Template Sequence		V	D	.	N	R	A	I	Y	D	W	L	M	E	K	L	N	F	D	P	R	P	.	H	Q	Y	E	F	G	R	R	G	L	E	Y	T	I	T	S	K	R	K	L	R	E	L	V	Q	A	G	R	V	S	G	W	D	D	P	R	M	P	T	L	R	A	Q	R	R	L	G	V	T	P	E	A	V	R	A	F	A	A
Template Known Secondary structure		T	T	.	T											T	T		S	S			.											T	T														T	T	S	S	S	S	T	T		T	T	S	S	B								T
Template Predicted Secondary structure				.																			.
Template SS confidence
		275	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		295	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		S	G	H	Y	R	.	S	Q	L	N	Y	S	E	E	N	L	K	Q	A	R	A	A	L
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		Q	I	G	V	S	R	T	N	R	T	V	D	I	A	V	Y	E	N	A	V	R	D	D
Template Known Secondary structure			S				S	S
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions