Job Description P21888 Confidence 98.40% Date Thu Jan 5 11:38:38 GMT 2012 Rank 65 Aligned Residues 213 % Identity 20% Template c2cycB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with l-tyrosine2 from pyrococcus horikoshii Resolution 2.20 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		H	A	G	E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	.	I	A	E	M	H
Query Conservation																																																																												.
Alig confidence											.																				.	.								.								.	.																											.
Template Conservation											.																				.	.								.								.	.
Template Sequence		I	G	A	P	L	Q	H	Y	I	.	G	F	E	I	S	G	Y	I	H	L	G	T	G	L	M	A	G	A	K	.	.	I	A	D	F	Q	K	A	.	G	I	K	T	R	V	F	.	.	L	A	D	W	H	S	W	I	N	D	K	L	G	G	D	L	E	V	I	Q	E	V	A	L	K	Y	F	K	V	G	M	E
Template Known Secondary structure		T	T				B				.						S			B											.	.							T	.	T		B					.	.									T	T	G	G	G	G												T
Template Predicted Secondary structure											.																				.	.								.								.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.		.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	F	D	A	L	N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V	D	D	K	R	N
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	I	E	V	M	G	G	D	P	K	K	V	E	F	V	L	A	S	E	I	L	E	K	G	D	Y	W	Q	T	V	I	D	I	.	.	.	.	.	.	.	.	.	S	K	N	V	T	L	S	R	V	M	R	S	I	T	I	M	G	R	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T			G	G	G	S					T					T												.	.	.	.	.	.	.	.	.		T	T	S							T	T	G	G	G	G	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																																														.	.	.	.	.	.	.	.
Query SS confidence																												.																																														.	.	.	.	.	.	.	.
Query Sequence		P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	.	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	.	.	.	.	.	.	.	.
Query Conservation																												.																																														.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.																												.																		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	A	I	D	F	A	K	L	I	Y	P	M	M	Q	V	A	D	I	F	Y	Q	G	V	T	I	A	H	A	G	M	D	Q	.	R	K	A	H	V	I	A	I	E	V	A	Q	K	L	R	Y	H	P	I	V	H	E	G	E	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			T																T	T		S						G	G	G	.											G	G	G		S	S	S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
																							158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.																			.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		Q	Y	V	N	Y	W	M	H	S	G	M	V	M	V	D	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	S	K	S	L	G	N	.	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.							.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		L	K	P	V	A	V	H	H	H	L	L	L	G	L	Q	E	P	P	K	W	P	I	E	S	E	E	E	F	K	E	I	K	A	Q	M	K	M	S	K	S	K	P	Y	S	A	V	F	I	H	D	.	.	.	.	.	S	P	E	E	I	R
Template Known Secondary structure													B		S	S			S	S	S	S			S												B	G	G	G	S		G	G	G	S		B	T	T		.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions