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Job DescriptionP21888
Confidence99.17%DateThu Jan 5 11:38:38 GMT 2012
Rank46Aligned Residues205
% Identity16%Templatec2cybA_
PDB info PDB header:ligaseChain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with2 l-tyrosine from archaeoglobus fulgidus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
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Query Sequence  HAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHK
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Template Sequence  TKEKPRAY. VGYEPSGEIHLGH. . . MMTVQKLMDLQEA. GFEIIVL. . LADIH. . . . . . AYLNEKGTFEEIAEVADYNKK
Template Known Secondary structure  S
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S

B...T.T
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   2930...... ...40......... 50.........60.. ....... 70.... .....80.........90.....
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  DFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNP
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Template Sequence  VFIALGLDESRAKFVLGSEYQLSRDYVLDVLKM. . . . . . . . . ARITTLNRARRSMDEVSRRKEDPMVSQ. . . . . . . . . . .
Template Known Secondary structure  TT

TTT
GGGTTTS.........S
TTTT
S
SSS

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   96...100.........110.........120........ .130.........140.........150.....
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  MDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . MIYPLMQALDIAHLGVDLAVGGIDQR. . KIHMLARENLPRLGYSSPVCLHTPI
Template Known Secondary structure  ...........................TT
SGGG..GGGGT





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   156...160.........170.........180. ........190.........200......
 
   259260.........270.........280.........290
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Query Sequence  MVMVDREKMSKSLGNFFTVRDVLKYYDAETVR
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Template Sequence  LVGLDGQKMSSSKGNYISVRD. . . . . PPEEVE
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B
TTSSB

TTTT
S
BTT
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   207..210.........220....... ..230...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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