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Job DescriptionP21888
Confidence98.46%DateThu Jan 5 11:38:38 GMT 2012
Rank63Aligned Residues207
% Identity19%Templatec1jiiA_
PDB info PDB header:ligaseChain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of s. aureus tyrrs in complex with sb-219383
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  HAGEVGMYVCGITVYDL. CHIGHGRTFVAFDVVARYLRFLGYKLKYVR. . . . . NITDIDDKIIKRANENGESFVAMVDRM
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Template Sequence  NKEQVTLY. CGADPTADSLHIGHLLPFL. . . . TLRRFQEHGHRPIVLIGGGTGMIGDPSGK. . . . SEERVLQTEEQVDKN
Template Known Secondary structure  S

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Query Sequence  IAEMHKDFDAL. . NILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVD
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Template Sequence  IEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDY. . . . . . . . . GKHVGVNYMLGKDSIQSRLEHGIS. . . . . .
Template Known Secondary structure  S

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   171........180.........190.........200.........210......... 220.........230.........240......
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Query Sequence  VVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGN. . . . HFDIHGGGSDLMFPHHENEIAQSTCAH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YTEFTYTILQAIDFGHLNRELNCKIQVGGSDQ. WGNITSGIELMRRMY
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GGG.T
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   165....170.........180.........190...... ...200.........210.
 
   247..250.........260.........270.........280..
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Query Sequence  DGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLK
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Template Sequence  GQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAEKT
Template Known Secondary structure  S
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   212.......220.........230.........240.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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