Job Description P21888 Confidence 98.90% Date Thu Jan 5 11:38:38 GMT 2012 Rank 49 Aligned Residues 216 % Identity 18% Template c1h3eA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from thermus thermophilus complexed2 with wild-type trnatyr(gua) and with atp and tyrosinol Resolution 2.90 Å

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		19	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure											.									.																																								.	.	.
Query SS confidence											.									.																																								.	.	.
Query Sequence		H	A	G	E	V	G	M	Y	V	.	C	G	I	T	V	Y	D	L	.	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	N	I	T	D	I	D	D	K	I	.	.	.	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I
Query Conservation											.									.																																								.	.	.
Alig confidence											.					.	.			.												.	.	.	.															.	.									.	.	.
Template Conservation																.	.															.	.	.	.															.	.
Template Sequence		E	G	R	P	L	T	V	K	L	G	A	D	P	T	.	.	R	P	D	L	H	L	G	H	A	V	V	L	R	K	.	.	.	.	M	R	Q	F	Q	E	L	G	H	K	V	V	L	I	.	.	I	G	D	F	T	G	M	I	G	D	P	S	G	R	S	K	T	R	P	P	L	T	L	E	E	T	R	E	N	A
Template Known Secondary structure		T		S											S	.	.	S	S			B										.	.	.	.						T	T	T							.	.			T	T								S	S		S	S
Template Predicted Secondary structure																.	.															.	.	.	.															.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		A	E	M	H	K	D	F	D	A	L	.	N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	D	L	D	Q	L	Q	A	G	A	R	V	D	V	V
Query Conservation												.
Alig confidence												.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	Y	V	A	Q	A	G	K	I	L	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	H	L	F	E	L	R	Y	N	S	E	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	L	T	F	K
Template Known Secondary structure									T	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T						T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.																									.	120	.	.	.	.	.	.	.	.	.	130	.	.																								.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		D	D	K	R	N	P	M	D	F	V	L	W	K	M	S	K	E	G	E	P	S	W	P	S	P	W	G	A	G	R	P	.	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	Q	Y	V
Query Conservation																																	.
Alig confidence																																	.																												.																				.
Template Conservation																																																													.																				.
Template Sequence		E	V	V	R	L	T	S	L	M	T	V	A	Q	M	L	E	R	E	D	F	K	K	R	Y	E	A	G	I	P	I	S	L	H	E	L	L	Y	P	F	A	Q	A	Y	D	S	V	A	I	R	A	D	V	E	M	G	G	T	D	Q	.	R	F	N	L	L	V	G	R	E	V	Q	R	A	Y	G	Q	S	P	Q	.
Template Known Secondary structure							G	G	G	S						T	T	S									T	T					G	G	G	G	T												T	T		S						G	G	G	.														T	T					.
Template Predicted Secondary structure																																																													.																				.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.		.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure												.				.
Query SS confidence												.				.
Query Sequence		N	Y	W	M	H	S	G	M	V	M	.	V	D	R	.	E	K	M	S	K	S	L	G	N	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R	Y	F	L	M	S	G	H
Query Conservation												.				.
Alig confidence		.										.				.																.	.	.	.	.
Template Conservation		.																														.	.	.	.	.
Template Sequence		.	V	C	F	L	M	P	L	L	V	G	L	D	G	R	E	K	M	S	K	S	L	D	N	Y	I	G	L	T	E	.	.	.	.	.	P	P	E	A	M	F	K	K	L	M	R	V	P
Template Known Secondary structure		.									B		T	T	S	S	S	B			T	T	T	T				B	T	T	S	.	.	.	.	.										T	T	S
Template Predicted Secondary structure		.																														.	.	.	.	.
Template SS confidence
			217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions