Return to main results Retrieve Phyre Job Id

Job DescriptionP05055
Confidence99.28%DateThu Jan 5 10:58:40 GMT 2012
Rank70Aligned Residues71
% Identity20%Templated2nn6h1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution3.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   619620.........630.........640.........650.........660.........670.........680.........690..
Predicted Secondary structure 






























Query SS confidence 









































































Query Sequence  IEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEA
Query Conservation     
 

 
 
  
  





  

  







   

  
 
    

 
 
     
  


 



  
Alig confidence 





































...
































Template Conservation 
 




 
 
  
   
  


     
 
 

    ...       



 
 


  

  
 
 

 
  
Template Sequence  GEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNE. . . LAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSL
Template Known Secondary structure 

SSB


TT
SSSS
SS



...S
SS


TTT

SS
Template Predicted Secondary structure 













...















Template SS confidence 









































































   78.80.........90.........100.........110..... ....120.........130.........140........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions