Return to main results Retrieve Phyre Job Id

Job DescriptionP05055
Confidence96.57%DateThu Jan 5 10:58:40 GMT 2012
Rank153Aligned Residues69
% Identity13%Templated2nn6g1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution3.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   619620.........630.........640.........650.........660.........670.........680........
Predicted Secondary structure 





























Query SS confidence 





































































Query Sequence  IEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLS
Query Conservation     
 

 
 
  
  





  

  







   

  
 
    

 
 
     
  


 

Alig confidence 



































.
































Template Conservation 
  

 


 
         


 
   
 
    
. 




 

 
  



 


       
 


Template Sequence  PVKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLSF. EGATKRNRPNVQVGDLIYGQFVVANKDMEPEMV
Template Known Secondary structure 

SSTT
SSSS


S
SS.S

SS
SSSSS
TT


TTS

Template Predicted Secondary structure 













.



















Template SS confidence 





































































   110.........120.........130.........140..... ....150.........160.........170........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions