 |
Job Description | P05055 | Confidence | 98.26% | Date | Thu Jan 5 10:58:40 GMT 2012 |
Rank | 120 | Aligned Residues | 83 |
% Identity | 13% | Template | d2nn6a2 |
SCOP info | Ribonuclease PH domain 2-like
| Ribonuclease PH domain 2-like
| Ribonuclease PH domain 2-like
|
Resolution | 3.35 |
|
 |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
|
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | F | N | G | P | I | G | A | A | R | V | G | Y | I | N | . |
. |
D | Q | Y | V | L | N | P | T | Q | D | E | L | K | E | S | K | L | D | L | V | V | A | G | T | E | A | A | . |
. |
V | L | M | V | E | S | E | A | Q | L | L | S | E | D | Q | M | L | G | A | V | V | F | G | H | E | Q | Q | Q | V | V | I | Q | N |
Query Conservation |   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
| . | . |
|
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |
|
|
|   |
|
|
|
|   |
|   | . | . |
|   |
|
|
|   |   |
|   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |
|   |
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|   |
|
|
|
|   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
L | S | I | H | H | M | P | I | C | V | S | F | A | F | F | Q | Q | G | T | Y | L | L | V | D | P | N | E | R | E | E | R | V | M | D | G | L | L | V | I | A | M | N | K | H | R | E | I | C | T | I | Q | S | S | G | G | I | M | L | L | K | D | Q | V | L | R | C | S | K | I | A | G | V | K | V | A | E | I | T | E | L |
Template Known Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| T | T | T | S | S |  |  |  | S |
|
|  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  | S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
  |
  |   |
219 | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
I | N | E | L | V | K | E |
Query Conservation |   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
Template Sequence |   |
I | L | K | A | L | E | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
265 | . | . | . | . | 270 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|