Return to main results Retrieve Phyre Job Id

Job DescriptionP05055
Confidence99.26%DateThu Jan 5 10:58:40 GMT 2012
Rank71Aligned Residues73
% Identity21%Templated2je6i1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution1.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   619620.........630.........640.........650.........660.. .......670.........680.........690.
Predicted Secondary structure 




















...








Query SS confidence 











































. . .




























Query Sequence  IEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKV. . . TDYLQMGQEVPVKVLEVDRQGRIRLSIKE
Query Conservation     
 

 
 
  
  





  

  







   

  
... 
    

 
 
     
  


 



 
Alig confidence 











































...




























Template Conservation 

 



 
 
  
   
  
 
     
 
  
                   

 
 
 
  

    
 



 
Template Sequence  PKINDIVIGLVEDVEIYGWVVDIKAPYKAYLPASNLLGRSINVGEDLRRYLDVGDYVIARIENFDRSIDPVLSVKG
Template Known Secondary structure 

TT

SS
SSSS
TS


TT


SSS

TT
TT

S
Template Predicted Secondary structure 




































Template SS confidence 











































































   70.........80.........90.........100.........110.........120.........130.........140.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions