Return to main results Retrieve Phyre Job Id

Job DescriptionP05055
Confidence89.47%DateThu Jan 5 10:58:40 GMT 2012
Rank171Aligned Residues55
% Identity31%Templated1hr0w_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   626...630........ .640.........650.. .......660.........670.........680. ....
Predicted Secondary structure 

.






.












.


Query SS confidence 












.













.




























.



Query Sequence  TGKVTRIVDFGAF. VAIGGGKEGLVHIS. QIADKRVEKVTDYLQMGQEVPVKVLEVDR. QGRI
Query Conservation   
 
  
  



.

  

  





.

   

  
 
    

 
 
     
 . 


Alig confidence 












.













.







.....















.



Template Conservation   
 
   

   
 
 
 

   

 
 




 

 .....
  

 
 

   

  



Template Sequence  EGVVTEALPNATFRVKLDSGPEILAYISGKMRMHYIR. . . . . ILPGDRVVVEITPYDPTRGRI
Template Known Secondary structure 




TTTB


SSS
B



T


.....

TT


TT
TT

Template Predicted Secondary structure 











.....










Template SS confidence 






























































   10.........20.........30.........40...... ...50.........60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions