Return to main results Retrieve Phyre Job Id

Job DescriptionP05055
Confidence100.00%DateThu Jan 5 10:58:40 GMT 2012
Rank15Aligned Residues142
% Identity49%Templated1e3ha2
SCOP infoRibosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribonuclease PH domain 1-like
Resolution2.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3...... 10.........20.........30......... 40.........50.........60.........70......
Predicted Secondary structure 

.....










.



















Query SS confidence 






. . . . .





























.




































Query Sequence  NPIVRKF. . . . . QYGQHTVTLETGMMARQATAAVMVSMDDTA. VFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGS
Query Conservation         .....    
 
 



 








 
  
 
 .




    
     

 





 

  
 




 
Alig confidence 






.....





























.




































Template Conservation           
 
    


 



 

  
 


    
 
 

 
            
   
 
 
     
    
  
Template Sequence  ETHYAEAVIDNGAFGTRTIRFETGRLARQAAGSAVAYLDDDTXVLSATTASKNPKDQLDFFPLTVDVEERXYAAGKIPGS
Template Known Secondary structure 


GGG
SSS
TTSSTTT
SS

TT
SS


GGGGT



S
Template Predicted Secondary structure 












































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   77..80.........90.........100.........110.........120.........130.........140....
Predicted Secondary structure 


























Query SS confidence 



































































Query Sequence  FFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIP
Query Conservation 
 



 


 


 





 




      



   


 

     










  



Alig confidence 



































































Template Conservation    

 
    


  



 




 
        

 
 
 

  

    









  



Template Sequence  FFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQVVATIXALNPDHLYDVVAINAASASTQLAGLP
Template Known Secondary structure  TTSS

S

S
TT

S


TTS

TT

Template Predicted Secondary structure 























Template SS confidence 



































































   84.....90.........100.........110.........120.........130.........140.........150.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions