Job Description P05055 Confidence 99.25% Date Thu Jan 5 10:58:40 GMT 2012 Rank 72 Aligned Residues 84 % Identity 15% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		608	.	610	.	.	.	.	.	.					.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.		.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.
Predicted Secondary structure											.	.	.	.																																															.																				.
Query SS confidence											.	.	.	.																																															.																				.
Query Sequence		A	I	R	R	I	E	E	I	T	.	.	.	.	A	E	I	E	V	G	R	V	Y	T	G	K	V	T	R	I	V	D	F	G	A	F	V	A	I	G	G	G	K	E	G	L	V	H	I	S	Q	I	A	D	K	R	V	E	K	V	.	T	D	Y	L	Q	M	G	Q	E	V	P	V	K	V	L	E	V	D	R	.
Query Conservation											.	.	.	.																																															.																				.
Alig confidence											.	.	.	.																																															.																				.
Template Conservation
Template Sequence		G	D	E	I	F	Q	S	L	T	G	E	S	E	K	T	F	F	K	G	S	I	I	P	V	R	V	E	R	F	W	H	N	D	I	I	C	T	T	N	S	E	V	E	C	V	V	N	A	Q	R	H	A	G	A	Q	L	R	R	P	A	N	E	I	Y	E	I	G	K	T	Y	P	A	K	V	I	Y	I	D	Y	A
Template Known Secondary structure										T				T	T	T	S		T	T												S	S							T	T	S							T	T	S	S	S	S	T	T	S		S		S	T	T	T	S		T	T												G	G
Template Predicted Secondary structure
Template SS confidence
		1117	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.
		682	.	.	.	.	.	.	.	690	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	R	I	R	L	S	I	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	T	A	E	V	S	L	L	D
Template Known Secondary structure		G	T
Template Predicted Secondary structure
Template SS confidence
		1197	.	.	1200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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