Job Description P05055 Confidence 100.00% Date Thu Jan 5 10:58:40 GMT 2012 Rank 18 Aligned Residues 208 % Identity 23% Template c3hkmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:os03g0854200 protein; PDBTitle: crystal structure of rice(oryza sativa) rrp46 Resolution 1.98 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	D	G	R	E	K	D	M	I	R	G	L	D	V	R	T	G	V	L	P	R	T	H	G	S	A	L	F	T	R	G	E	T	Q	A	L	V	T	A	T	L	G	T	A	R	D	A	Q	V	L	D	E	L	M	G	E	R	T	D	T	F	L	F	H	Y	N	F	P	P	Y	S	V	G	E	T	G	M	V	G
Query Conservation
Alig confidence																																										.												.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																																										.												.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		R	A	D	G	R	N	P	N	Q	L	R	P	F	S	C	T	R	N	P	L	D	R	A	H	G	S	A	R	W	A	Q	G	D	T	I	V	L	A	A	V	.	Y	G	P	K	P	G	T	R	K	G	E	.	.	.	.	.	N	P	E	K	A	S	I	E	V	V	W	K	P	M	T	.	.	.	.	.	.	.	G
Template Known Secondary structure			T	T	S			T	T													S	S	S	S								T	T								.						S			T	T	S	.	.	.	.	.		T	T	S										S	S	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																										.												.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70								.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		S	P	K	R	R	E	I	G	H	G	R	L	A	K	R	G	V	L	A	V	M	P	D	M	D	K	F	P	Y	T	.	V	R	V	V	S	E	I	T	E	S	N	G	S	S	S	M	A	S	V	C	G	A	S	L	A	L	M	D	A	G	V	P	I	K	A	A	V	A	G	I	A	M	G	L	V	K	E	G	D
Query Conservation																																.
Alig confidence																							.									.
Template Conservation																							.
Template Sequence		Q	I	G	K	Q	E	K	E	Y	E	M	T	L	K	R	T	L	Q	S	I	C	.	L	L	T	V	H	P	N	T	T	T	S	V	I	L	Q	V	V	G	N	D	G	S	L	L	P	C	A	I	N	A	C	C	A	A	L	V	F	A	G	I	P	L	K	H	L	A	V	A	I	G	C	G	V	L	E	D	G	E
Template Known Secondary structure		S			T	T																B	.		T	T	S	S	S	S													S	S																		T			B	S	S											S	S	S
Template Predicted Secondary structure																							.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490					.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		N	Y	V	V	L	S	D	I	L	G	D	E	D	H	L	G	D	.	.	.	.	M	D	F	K	V	A	G	S	R	D	G	I	S	A	L	Q	M	D	I	K	I	E	G	I	T	K	E	I	M	Q	V	A	L	N	Q	A	K	G	A	R	L	H	I	L	G	V	M	E	Q	A	I	N	A
Query Conservation																			.	.	.	.
Alig confidence		.	.	.															.	.	.	.																		.	.	.	.
Template Conservation		.	.	.																																				.	.	.	.
Template Sequence		.	.	.	V	I	L	D	T	N	K	A	E	E	Q	Q	L	K	S	F	A	H	L	V	F	P	N	S	R	K	R	G	L	I	T	S	I	T	H	.	.	.	.	G	V	M	S	E	E	D	Y	F	S	C	I	E	R	G	L	A	A	S	S	R	I	S	D	F	M	R	T	T	L	Q	K
Template Known Secondary structure		.	.	.				S										S																S						.	.	.	.																												T	T	T	T
Template Predicted Secondary structure		.	.	.																																				.	.	.	.
Template SS confidence
					151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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