Job Description P05055 Confidence 98.39% Date Thu Jan 5 10:58:40 GMT 2012 Rank 105 Aligned Residues 73 % Identity 21% Template c3h0gS_ PDB info PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase ii subunit rpb7; PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

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		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.											.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.		.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		I	T	A	E	I	E	V	G	R	V	Y	T	G	K	V	T	R	I	V	D	F	G	A	F	V	A	I	G	G	G	K	E	G	L	V	H	I	S	Q	I	A	D	K	R	V	E	K	V	T	D	.	.	.	.	.	.	.	.	.	.	Y	L	Q	M	G	Q	E	V	P	V	K	V	L	E	V	D	R	.	Q	G
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																													.																							.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																													.
Template Sequence		V	L	W	R	P	F	R	G	E	V	V	D	A	I	V	T	T	V	N	K	M	G	F	F	A	N	I	.	G	P	L	N	V	F	V	S	S	H	L	V	P	P	D	M	K	F	D	P	T	A	N	P	P	N	Y	S	G	E	D	Q	V	I	E	K	G	S	N	V	R	L	K	I	V	G	T	R	T	D	A	T
Template Known Secondary structure								T	T												T	T						B	.	T	T	B						G	G	G	S		T	T				B	S	S	S	S	S		B			S	S	S					S	S													S	S	S
Template Predicted Secondary structure																													.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		684	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	F	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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