Job Description P05055 Confidence 88.95% Date Thu Jan 5 10:58:40 GMT 2012 Rank 172 Aligned Residues 79 % Identity 18% Template c2ytxA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the second cold-shock domain of the human2 kiaa0885 protein (unr protein) Resolution UNK

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		623	.	.	.	.	.	.	630	.	.	.	.		.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		R	V	Y	T	G	K	V	T	R	I	V	D	.	F	G	A	F	V	A	I	G	G	G	K	E	G	L	V	H	I	S	Q	I	A	D	K	R	V	E	K	V	T	D	Y	L	Q	M	G	Q	E	V	P	V	K	V	L	E	V	D	R	Q	G	R	I	R	L	S	I	K	E	A	T	E	Q	S	Q	P	A	A	A
Query Conservation														.
Alig confidence														.																											.	.	.	.	.										.
Template Conservation																																									.	.	.	.	.										.
Template Sequence		A	R	C	Q	G	V	V	C	A	M	K	E	A	F	G	F	I	E	R	G	D	V	V	K	E	I	F	F	H	Y	S	E	F	K	G	D	L	E	T	.	.	.	.	.	L	Q	P	G	D	D	V	E	F	.	T	I	K	D	R	N	G	K	E	V	A	T	D	V	R	L	L	P	Q	G	T	V	I	F	E	D
Template Known Secondary structure													S	S							S	S	S								T	T	T			S		T	T	S	.	.	.	.	.			S							.						S	S	S		B										S	S					S
Template Predicted Secondary structure																																									.	.	.	.	.										.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		702	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	A	P	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	G	P	S	S
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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