Job Description P05055 Confidence 99.98% Date Thu Jan 5 10:58:40 GMT 2012 Rank 26 Aligned Residues 223 % Identity 16% Template c2wp8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exosome complex component rrp45; PDBTitle: yeast rrp44 nuclease Resolution 3.00 Å

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		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	N	V	V	R	S	R	V	L	A	G	E	P	R	I	D	G	R	E	K	D	M	I	R	G	L	D	V	R	T	G	V	L	P	R	T	H	G	S	A	L	F	T	R	G	E	T	Q	A	L	V	T	A	T	L	G	T	A	R	D	A	Q	V	L	D	E	L	M	G	E	R	T	D	T	F	L	F	H	Y
Query Conservation
Alig confidence										.																								.	.	.																					.			.	.	.	.
Template Conservation										.																								.	.	.																					.			.	.	.	.
Template Sequence		E	S	K	F	I	L	E	A	.	L	R	Q	N	Y	R	L	D	G	R	S	F	D	Q	F	R	D	V	E	I	T	F	G	.	.	.	K	E	F	G	D	V	S	V	K	M	G	N	T	K	V	H	C	R	I	S	.	C	Q	.	.	.	.	I	A	Q	P	Y	E	D	R	P	F	E	G	L	F	V	I	S	T
Template Known Secondary structure										.		T	T	T			T	T	S			T	T											.	.	.	S	S	T	T							T	T									.			.	.	.	.			.			S	S		T	T
Template Predicted Secondary structure										.																								.	.	.																					.			.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure																																														.																																	.	.	.
Query SS confidence																																														.																																	.	.	.
Query Sequence		N	F	P	P	Y	S	V	G	E	T	G	M	V	G	S	P	K	R	R	E	I	G	H	G	R	L	A	K	R	G	V	L	A	V	M	P	D	M	D	K	F	P	Y	T	.	V	R	V	V	S	E	I	T	E	S	N	G	S	S	S	M	A	S	V	C	G	A	S	L	A	L	M	D	A	G	V	P	.	.	.
Query Conservation																																														.																																	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.									.																																	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Sequence		E	I	S	I	I	E	K	S	V	R	R	S	G	A	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	G	L	C	.	I	V	A	G	S	K	C	W	A	V	R	A	D	V	H	F	L	D	C	D	G	G	F	I	D	A	S	C	I	A	V	M	A	G	L	M	H	F	K	K	P	D	I	T
Template Known Secondary structure													T	T	S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G		.			T	T	T															S	S																							B
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.															.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
																						457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	A	A	V	A	G	I	A	M	G	L	V	K	E	G	D	N	Y	V	V	L	S	D	I	L	G	D	E	D	H	L	G	D	M	D	F	K	V	A	G	S	R	D	G	.	I	S	A	L	Q	M	D	I	K	I	E	G	I	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.																										.										.
Template Conservation																																					.	.	.	.	.																																				.
Template Sequence		V	H	G	E	Q	I	I	V	H	P	V	N	E	R	E	P	V	P	L	G	I	L	H	I	P	I	C	V	T	F	S	F	F	N	I	.	.	.	.	.	S	I	I	D	A	T	L	K	E	E	L	L	R	D	G	V	L	T	V	T	L	N	K	N	R	E	V	V	Q	V	S	K	A	G	G	.	L	P	M	D
Template Known Secondary structure			T	T	S	S			B			S	S	S	S							B	S														.	.	.	.	.				S										S									T	T	S									S	S	.	S
Template Predicted Secondary structure																																					.	.	.	.	.																																				.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	I	M	Q	V	A	L	N	Q	A	K	G	A	R	L	H	I	L	G	V	M	E	Q	A	I	N	A	P	R	G	D	I	S	E	F	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	T	L	M	K	C	C	H	E	A	Y	S	I	I	E	K	I	T	D	Q	I	L	Q	L	L	K	E	D	S	E	K	R	N	K	Y	A	A
Template Known Secondary structure																																				T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions