Job Description P05055 Confidence 93.71% Date Thu Jan 5 10:58:40 GMT 2012 Rank 161 Aligned Residues 74 % Identity 11% Template c2rf4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660												.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.		.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		I	T	A	E	I	E	V	G	R	V	Y	T	G	K	V	T	R	I	V	D	F	G	A	F	V	A	I	G	G	G	K	E	G	L	V	H	I	S	Q	I	A	D	K	R	V	E	.	.	.	.	.	.	.	.	.	.	.	K	V	T	D	Y	L	Q	M	G	Q	E	V	P	V	K	V	L	E	V	D	R	.	Q
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		Y	V	W	Q	P	Q	V	G	D	V	L	E	G	Y	I	F	I	Q	S	A	S	H	I	G	L	L	I	H	D	A	F	N	A	S	I	K	K	N	N	I	P	V	D	W	T	F	V	H	N	D	G	N	S	L	G	H	W	V	D	S	N	G	E	P	I	D	G	K	L	R	F	T	V	R	N	V	H	T	T	G
Template Known Secondary structure								T	T												S	S							T	T	T							S	T	T	S		S	S		B					S								B		S	S			B			S													S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		683	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	I	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	V	S	V	D
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions