Job Description P05055 Confidence 98.14% Date Thu Jan 5 10:58:40 GMT 2012 Rank 133 Aligned Residues 66 % Identity 18% Template c2qndA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:fmr1 protein; PDBTitle: crystal structure of the kh1-kh2 domains from human fragile x mental2 retardation protein Resolution 1.90 Å

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		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.		.	.	.	.	590	.	.	.												.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure																																		.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	H	T	I	K	I	N	P	D	K	I	K	D	V	I	G	K	G	G	S	V	I	R	A	L	T	E	E	T	G	T	.	T	I	E	I	E	D	D	G	.	.	.	.	.	.	.	.	.	.	.	T	V	K	I	A	A	T	D	G	E	K	A	K	H	A	I	R	R	I	E	E	I	T	A	E	I	E
Query Conservation																																		.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.									.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																																												.
Template Sequence		A	E	D	V	I	Q	V	P	R	N	L	V	G	K	V	I	G	K	N	G	K	L	I	Q	E	I	V	D	K	S	G	V	V	R	V	R	I	E	A	E	N	E	K	N	V	P	Q	E	E	G	X	V	P	F	V	F	V	G	.	T	K	D	S	I	A	N	A	T	V	L	L	D	Y	H	L	N	Y	L	K
Template Known Secondary structure										G	G	G							G	G	G											T		S									T	T						T	T									.																		T
Template Predicted Secondary structure																																																												.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions