Job Description P05055 Confidence 100.00% Date Thu Jan 5 10:58:40 GMT 2012 Rank 12 Aligned Residues 235 % Identity 20% Template c2pnzB_ PDB info PDB header:hydrolase/hydrolase Chain: B: PDB Molecule:probable exosome complex exonuclease 2; PDBTitle: crystal structure of the p. abyssi exosome rnase ph ring2 complexed with udp and gmp Resolution 2.14 Å

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		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	N	V	V	R	S	R	V	L	A	G	E	P	R	I	D	G	R	E	K	D	M	I	R	G	L	D	V	R	T	G	V	L	P	R	T	H	G	S	A	L	F	T	R	G	E	T	Q	A	L	V	T	A	T	L	G	T	A	R	D	A	Q	V	L	D	E	L	M	G	E	R	T	D	T	F	L	F	H
Query Conservation
Alig confidence										.																																																.							.	.	.	.
Template Conservation										.																																																.							.	.	.	.
Template Sequence		I	M	R	D	H	I	I	N	.	L	L	K	E	G	K	R	I	D	D	R	G	F	E	D	Y	R	P	I	E	I	E	V	G	V	I	E	K	A	E	G	S	A	L	V	K	L	G	S	T	Q	V	L	V	G	I	K	.	T	S	L	G	E	P	.	.	.	.	F	P	D	T	P	N	M	G	V	M	T	T	N
Template Known Secondary structure										.				T	T			T	T	S			T	T										S		S	S	S	S	S								T	T									.							.	.	.	.		T	T		T	T	S
Template Predicted Secondary structure										.																																																.							.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.										.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.
Query Sequence		Y	N	F	P	P	Y	S	V	G	E	T	G	M	V	G	S	P	K	R	R	E	I	G	H	G	R	L	A	K	R	G	V	L	A	V	.	.	.	.	.	.	.	.	.	M	P	D	M	D	K	F	P	Y	T	V	R	V	V	S	E	I	T	E	S	N	G	S	S	S	M	A	S	V	C	G	A	S	L	A	L
Query Conservation																																					.	.	.	.	.	.	.	.	.
Alig confidence																	.																				.	.	.	.	.	.	.	.	.		.
Template Conservation																	.																														.
Template Sequence		V	E	L	V	P	L	A	S	P	T	F	E	P	G	P	.	P	D	E	R	A	I	E	L	A	R	V	I	D	R	G	I	R	E	S	K	A	L	N	L	E	K	M	V	I	.	V	P	G	K	I	V	R	V	V	F	I	D	V	H	V	L	D	H	D	G	N	L	M	D	A	I	G	I	A	A	I	A	A	L
Template Known Secondary structure						G	G	G		T	T			S	S	S	.																			T	T	S	B		G	G	G	G			.		T	T	T															S	S
Template Predicted Secondary structure																	.																														.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		451	.	.	.	.	.																						.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	A	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	A	A	V	A	G	I	A	M	G	L	V	K	E	G	D	N	Y	V	V	L	S	D	I	L	G	D	E	D	H	L	G	D	M	D	F	K	V	A	G	S	R	D	G	I	S	A	L	Q	M	D	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		L	N	A	R	V	P	K	V	R	Y	N	E	E	T	G	E	V	E	T	L	D	E	T	E	P	L	P	V	E	K	I	P	V	P	V	T	F	A	K	I	.	.	.	.	G	N	I	L	V	V	D	P	S	L	D	E	E	L	V	M	D	G	K	I	T	I	T	T	D	E	T	G	H	I	S	A	V	Q	K	S
Template Known Secondary structure													T	T	T														B													.	.	.	.	T	T					S							T	T		S									T	T	S
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	E	G	I	T	K	E	I	M	Q	V	A	L	N	Q	A	K	G	A	R	L	H	I	L	G	V	M	E	Q	A	I	N	A	P	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	G	A	F	K	L	E	E	V	M	Y	A	V	E	T	A	F	K	K	A	E	E	I	R	K	L	I	L	E	A	V	E	K	A	K	Q
Template Known Secondary structure		S	S																																	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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