Job Description P05055 Confidence 100.00% Date Thu Jan 5 10:58:40 GMT 2012 Rank 23 Aligned Residues 220 % Identity 21% Template c2nn6F_ PDB info PDB header:hydrolase/transferase Chain: F: PDB Molecule:exosome component 6; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 Resolution 3.35 Å

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		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	K	D	M	I	R	G	L	D	V	R	T	G	V	L	P	R	T	H	G	S	A	L	F	T	R	G	E	T	Q	A	L	V	T	A	T	L	G	T	A	R	D	A	Q	V	L	D	E	L	M	G	E	R	T	D	T	F	L	F	H	Y	N	F	P	P	Y	S	V	G	E	T	G	M	V	G	S	P	K	R
Query Conservation
Alig confidence																																						.						.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																						.						.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		R	D	P	T	R	L	R	P	V	Y	A	R	A	G	L	L	S	Q	A	K	G	S	A	Y	L	E	A	G	G	T	K	V	L	C	A	V	.	S	G	P	R	Q	.	.	.	.	.	.	.	.	.	.	A	L	R	G	R	L	L	C	D	F	R	R	A	P	F	A	G	R	R	R	R	A	P	P	.	G	G	C
Template Known Secondary structure				S	S										S			S	S	S	S							S	S	S								.						.	.	.	.	.	.	.	.	.	.			B											T	T	S	S	S	S				S		.
Template Predicted Secondary structure																																						.						.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		R	E	I	G	H	G	R	L	A	K	R	G	V	L	A	V	M	P	D	M	D	K	F	P	Y	T	.	V	R	V	V	S	E	I	T	E	S	N	G	S	S	S	M	A	S	V	C	G	A	S	L	A	L	M	D	A	G	V	P	I	K	A	A	V	A	G	I	A	M	G	L	V	K	E	G	D	N	Y	V	V
Query Conservation																												.
Alig confidence																			.									.																																														.
Template Conservation																			.																																																							.
Template Sequence		E	E	R	E	L	A	L	A	L	Q	E	A	L	E	P	A	V	.	R	L	G	R	Y	P	R	A	Q	L	E	V	S	A	L	L	L	E	D	G	G	S	A	L	A	A	A	L	T	A	A	A	L	A	L	A	D	A	G	V	E	M	Y	D	L	V	V	G	C	G	L	S	L	A	.	P	G	P	A	P	T	W
Template Known Secondary structure															T	T	T	B	.		S	T	T	S	B	T														S	S																				B	S	S											.	S		S	S
Template Predicted Secondary structure																			.																																																							.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	I	L	G	D	E	D	H	L	G	D	M	D	F	K	V	A	G	S	R	D	G	I	S	A	L	Q	M	D	I	K	I	E	G	I	T	K	E	I	M	Q	V	A	L	N	Q	A	K	G	A	R	L	H	I	L	G	V	M	E	Q	A	I	N	A	P	R	G	D	I	S	E	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	D	P	T	R	L	E	E	E	R	A	A	A	G	L	T	V	A	L	M	P	V	L	N	Q	V	A	G	L	L	G	S	G	E	G	G	L	T	E	S	W	A	E	A	V	R	L	G	L	E	G	C	Q	R	L	Y	P	V	L	Q	Q	S	L	V	R	A	A	R	R	R	G	A	A	A
Template Known Secondary structure			S	S			T	T	T	G	G	G		S	S								T	T	T	T											S	S		T	T	T	T																															T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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