Job Description P05055 Confidence 100.00% Date Thu Jan 5 10:58:40 GMT 2012 Rank 16 Aligned Residues 227 % Identity 18% Template c2nn6C_ PDB info PDB header:hydrolase/transferase Chain: C: PDB Molecule:exosome complex exonuclease rrp43; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 Resolution 3.35 Å

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		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	V	L	A	G	E	P	R	I	D	G	R	E	K	D	M	I	R	G	L	D	V	R	T	G	V	L	P	R	T	H	G	S	A	L	F	T	R	G	E	T	Q	A	L	V	T	A	T	L	G	T	A	R	D	A	Q	V	L	D	E	L	M	G	E	R	T	D	T	F	L	F	H	Y	N	F	P	P	Y	S
Query Conservation
Alig confidence																																																		.								.	.	.	.
Template Conservation																																																		.								.	.	.	.
Template Sequence		R	R	F	L	K	E	N	C	R	P	D	G	R	E	L	G	E	F	R	T	T	T	V	N	I	G	S	I	S	T	A	D	G	S	A	L	V	K	L	G	N	T	T	V	I	C	G	V	.	K	A	E	F	A	A	P	.	.	.	.	S	T	D	A	P	D	K	G	Y	V	V	P	N	V	D	L	P	P	L	C
Template Known Secondary structure							T	S			T	T	S			S					S						T			S	S	S	S								T	T								.								.	.	.	.		S	S	S	T	T												S	S	S
Template Predicted Secondary structure																																																		.								.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.									.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																																													.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.																																													.	.	.
Query Sequence		V	G	E	T	G	M	V	G	S	P	K	R	R	E	I	G	H	G	R	L	A	K	R	G	V	.	.	.	.	.	.	.	.	L	A	V	M	P	D	M	D	K	F	P	Y	T	V	R	V	V	S	E	I	T	E	S	N	G	S	S	S	M	A	S	V	C	G	A	S	L	A	L	M	D	A	G	V	.	.	.
Query Conservation																											.	.	.	.	.	.	.	.																																													.	.	.
Alig confidence										.																	.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation										.
Template Sequence		S	S	R	F	R	S	G	P	.	P	G	E	E	A	Q	V	A	S	Q	F	I	A	D	V	I	E	N	S	Q	I	I	Q	K	E	D	L	C	I	S	P	G	K	L	V	W	V	L	Y	C	D	L	I	C	L	D	Y	D	G	N	I	L	D	A	C	T	F	A	L	L	A	A	L	K	N	V	Q	L	P	E	V
Template Known Secondary structure			T	T	S		S	S	S	.																						S							S	S	B	T	T	B											S	S			S		T	T													T
Template Predicted Secondary structure										.
Template SS confidence
		90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																					456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	K	A	A	V	A	G	I	A	M	G	L	V	K	E	G	D	N	Y	V	V	L	S	D	I	L	G	D	E	D	H	L	G	D	M	D	F	K	V	A	G	S	R	D	G	.	I	S	A	L	Q	M	D	I	K	I	E	G	I	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																											.										.
Template Conservation																																						.	.	.																																					.
Template Sequence		T	I	N	E	E	T	A	L	A	E	V	N	L	K	K	K	S	Y	L	N	I	R	T	H	P	V	A	T	S	F	A	V	F	D	D	T	.	.	.	L	L	I	V	D	P	T	G	E	E	E	H	L	A	T	G	T	L	T	I	V	M	D	E	E	G	K	L	C	C	L	H	K	P	G	G	.	S	G	L	T
Template Known Secondary structure			B		S	S	S	B				T	T	S				S		S			S												T	T	T	.	.	.					S			T	T	T	T	T	S		S									T	T									S			.	S
Template Predicted Secondary structure																																						.	.	.																																					.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	I	M	Q	V	A	L	N	Q	A	K	G	A	R	L	H	I	L	G	V	M	E	Q	A	I	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	K	L	Q	D	C	M	S	R	A	V	T	R	H	K	E	V	K	K	L	M	D	E	V	I	K	S
Template Known Secondary structure																									T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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