Job Description P05055 Confidence 98.20% Date Thu Jan 5 10:58:40 GMT 2012 Rank 128 Aligned Residues 64 % Identity 22% Template c2hh3A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:kh-type splicing regulatory protein; PDBTitle: solution structure of the third kh domain of ksrp Resolution UNK

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		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.							.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		H	T	I	K	I	N	P	D	K	I	K	D	V	I	G	K	G	G	S	V	I	R	A	L	T	E	E	T	G	T	T	I	E	I	E	D	D	G	T	.	.	.	.	.	.	V	K	I	A	A	T	D	G	E	K	A	K	H	A	I	R	R	I	E	E	I	T	A	E	I	E
Query Conservation																																									.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.						.
Template Conservation																																																				.
Template Sequence		I	D	V	P	V	P	R	H	S	V	G	V	V	I	G	R	S	G	E	M	I	K	K	I	Q	N	D	A	G	V	R	I	Q	F	K	Q	D	D	G	T	G	P	E	K	I	A	H	I	M	G	.	P	P	D	R	C	E	H	A	A	R	I	I	N	D	L	L	Q	S	L	R
Template Known Secondary structure								T	T	T						T	T	T	T											T							S	S		S	S	S	S								S	.	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions