Job Description P05055 Confidence 98.37% Date Thu Jan 5 10:58:40 GMT 2012 Rank 107 Aligned Residues 63 % Identity 32% Template c2hh2A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:kh-type splicing regulatory protein; PDBTitle: solution structure of the fourth kh domain of ksrp Resolution UNK

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		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.										.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.
Query Sequence		H	T	I	K	I	N	P	D	K	I	K	D	V	I	G	K	G	G	S	V	I	R	A	L	T	E	E	T	G	T	T	I	E	I	E	D	D	G	.	.	.	.	.	.	.	.	.	T	V	K	I	A	A	T	D	G	E	K	A	K	H	A	I	R	R	I	E	E	I	T	A	E	I
Query Conservation																																								.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.							.
Template Conservation																																																							.
Template Sequence		M	T	F	S	I	P	T	H	K	C	G	L	V	I	G	R	G	G	E	N	V	K	A	I	N	Q	Q	T	G	A	F	V	E	I	S	R	Q	L	P	P	N	G	D	P	N	F	K	L	F	I	I	R	G	.	S	P	Q	Q	I	D	H	A	K	Q	L	I	E	E	K	I	E	G	P
Template Known Secondary structure								G	G	G	T	T	T	T	S	T	T	T	T										S	S	S										T	T			T	T								S	.																S		S
Template Predicted Secondary structure																																																							.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions