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Job Description | P05055 | Confidence | 98.52% | Date | Thu Jan 5 10:58:40 GMT 2012 |
Rank | 100 | Aligned Residues | 104 |
% Identity | 22% | Template | c2e3uA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:hypothetical protein ph1566; |
PDBTitle: crystal structure analysis of dim2p from pyrococcus horikoshii ot3
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Resolution | 2.30 Å |
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520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
Q | V | A | L | N | Q | A | K | G | A | R | L | H | I | L | G | V | M | E | Q | A | I | N | A | P | R | G | D | I | S | E | F | A | P | R | I | H | T | . |
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I | K | I | N | P | D | K | I | K | D | V | I | G | K | G | G | S | V | I | R | A | L | T | E | E | T | G | T | T | I | E | I | E | D | D | G | T | V | K | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | L | A | V | W | K | A | R | D | I | V | L | A | I | G | R | G | F | S | P | E | R | A | F | R | L | L | N | E | G | E | Y | L | E | I | I | N | L | T | D | I | I | A | L | P | R | V | R | G | R | I | I | G | R | K | G | R | T | R | Q | I | I | E | E | M | S | G | A | S | V | S | V | . |
Y | G | K | T | V | A | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
. | 160 | . | . | . | . | . |
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598 | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | A | T | D | G | E | K | A | K | H | A | I | R | R | I | E | E | I | T | A | E | I | E | V | G | R | V | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | G | . |
N | P | I | Q | I | E | I | A | K | T | A | I | E | K | L | A | R | G | S | P | H | G | S | V | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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172 | . | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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