Job Description P05055 Confidence 100.00% Date Thu Jan 5 10:58:40 GMT 2012 Rank 21 Aligned Residues 220 % Identity 20% Template c2br2G_ PDB info PDB header:hydrolase Chain: G: PDB Molecule:exosome complex exonuclease 2; PDBTitle: rnase ph core of the archaeal exosome Resolution 2.8 Å

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		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	E	K	N	V	V	R	S	R	V	L	A	G	E	P	R	I	D	G	R	E	K	D	M	I	R	G	L	D	V	R	T	G	V	L	P	R	T	H	G	S	A	L	F	T	R	G	E	T	Q	A	L	V	T	A	T	L	G	T	A	R	D	A	Q	V	L	D	E	L	M	G	E	R	T	D	T	F	L	F
Query Conservation
Alig confidence												.																																															.			.	.	.	.
Template Conservation												.																																															.			.	.	.	.
Template Sequence		I	I	K	K	E	S	I	V	S	L	.	F	E	K	G	I	R	Q	D	G	R	K	L	T	D	Y	R	P	L	S	I	T	L	D	Y	A	K	K	A	D	G	S	A	L	V	K	L	G	T	T	M	V	L	A	G	T	K	.	L	E	.	.	.	.	I	D	K	P	Y	E	D	T	P	N	Q	G	N	L	I	V
Template Known Secondary structure												.			T	T			T	T	S			T	T										T		S	T	T	S	S								T	T									.			.	.	.	.						T	T		T	T
Template Predicted Secondary structure												.																																															.			.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.									.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.														.
Query SS confidence																																			.	.	.	.	.	.	.	.														.
Query Sequence		H	Y	N	F	P	P	Y	S	V	G	E	T	G	M	V	G	S	P	K	R	R	E	I	G	H	G	R	L	A	K	R	G	V	.	.	.	.	.	.	.	.	L	A	V	M	P	D	M	D	K	F	P	Y	T	.	V	R	V	V	S	E	I	T	E	S	N	G	S	S	S	M	A	S	V	C	G	A	S	L	A
Query Conservation																																			.	.	.	.	.	.	.	.														.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.					.									.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		N	V	E	L	L	P	D	E	.	.	.	.	.	.	.	.	.	.	.	.	N	A	I	E	L	A	R	V	V	D	R	S	L	R	D	S	K	A	L	D	L	T	K	L	V	.	I	E	P	G	K	S	V	W	T	V	W	L	D	V	Y	V	L	D	Y	G	G	N	V	L	D	A	C	T	L	A	S	V	A	A
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.															T	T	T	S	B		G	G	G	G		.			T	T	T																S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		87	.	.	90	.	.	.	.													.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		450	.	.	.																		.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Query Sequence		L	M	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	P	I	K	A	A	V	A	G	I	A	M	G	L	V	K	E	G	D	N	Y	V	V	L	S	D	I	L	G	D	E	D	H	L	G	D	M	D	F	K	V	A	G	S	R	D	G	.	I	S	A	L	Q	M	D	I	K	I
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.																													.										.
Template Conservation																																							.	.	.	.																																							.
Template Sequence		L	Y	N	T	K	V	Y	K	V	E	Q	I	S	V	N	K	N	E	V	V	G	K	L	P	L	N	Y	P	V	V	T	I	S	V	A	K	V	.	.	.	.	D	K	Y	L	V	V	D	P	D	L	D	E	E	S	I	M	D	A	K	I	S	F	S	Y	T	P	D	L	K	I	V	G	I	Q	K	S	G	K	.
Template Known Secondary structure																										B													.	.	.	.	T	T					S										S									T	T										S	S	.
Template Predicted Secondary structure																																							.	.	.	.																																							.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	I	T	K	E	I	M	Q	V	A	L	N	Q	A	K	G	A	R	L	H	I	L	G	V	M	E	Q	A	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	M	S	L	Q	D	I	D	Q	A	E	N	T	A	R	S	T	A	V	K	L	L	E	E	L	K	K	H	L	G
Template Known Secondary structure		S																														T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions