Job Description P05055 Confidence 88.91% Date Thu Jan 5 10:58:40 GMT 2012 Rank 173 Aligned Residues 81 % Identity 17% Template c1x65A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:unr protein; PDBTitle: solution structure of the third cold-shock domain of the human2 kiaa0885 protein (unr protein) Resolution UNK

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		623	.	.	.	.	.	.	630	.	.	.	.		.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.		.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure														.																																																.
Query SS confidence														.																																																.
Query Sequence		R	V	Y	T	G	K	V	T	R	I	V	D	.	F	G	A	F	V	A	I	G	G	G	K	E	G	L	V	H	I	S	Q	I	A	D	K	R	V	E	K	V	T	D	Y	L	Q	M	G	Q	E	V	P	V	K	V	L	E	V	D	R	.	Q	G	R	I	R	L	S	I	K	E	A	T	E	Q	S	Q	P	A	A
Query Conservation														.																																																.
Alig confidence														.																										.	.	.	.	.	.																	.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		G	R	E	M	G	V	I	A	A	M	R	D	G	F	G	F	I	K	C	V	D	R	D	V	R	M	F	F	H	F	S	E	I	L	D	G	N	Q	.	.	.	.	.	.	L	H	I	A	D	E	V	E	F	T	V	V	P	D	M	L	S	A	Q	R	N	H	A	I	R	I	K	K	L	P	K	G	T	V	S	F
Template Known Secondary structure													T	T	B						S	S	S	S	S					B	T	T	G	G	G	G	S			.	.	.	.	.	.			T	T								B			S	S	S					B			S						B	T	T	B
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		701	.	.	.	.	.	.	.	.	710
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	A	P	A	A	E	Q	G
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		H	S	H	.	S	G	P	S	S	G
Template Known Secondary structure					.
Template Predicted Secondary structure					.
Template SS confidence
		81	.	.		.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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