Job Description P05055 Confidence 100.00% Date Thu Jan 5 10:58:40 GMT 2012 Rank 11 Aligned Residues 219 % Identity 24% Template c1udsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribonuclease ph; PDBTitle: crystal structure of the trna processing enzyme rnase ph r126a mutant2 from aquifex aeolicus Resolution 2.30 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		R	I	D	G	R	E	K	D	M	I	R	G	L	D	V	R	T	G	V	L	P	R	T	H	G	S	A	L	F	T	R	G	E	T	Q	A	L	V	T	A	T	L	G	T	A	R	D	A	Q	V	L	D	E	L	M	G	E	R	T	D	T	F	L	F	H	Y	N	F	P	P	Y	S	V	G	E	T	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																										.													.	.	.																						.	.	.
Template Conservation																																										.													.	.	.
Template Sequence		R	S	D	G	R	K	E	D	Q	L	R	P	V	S	I	Q	R	D	F	L	E	Y	P	E	G	S	C	L	I	S	F	G	K	T	K	V	I	C	T	A	.	S	V	I	E	N	V	P	N	W	L	K	G	.	.	.	K	G	Q	G	W	I	T	A	E	Y	S	M	L	P	R	A	T	Q	Q	R	T	I	R	E
Template Known Secondary structure			T	T	S			T	T												S	S	S	S	S								T	T								.				S				G	G	G	T	T	.	.	.	S	S												S			T	T						S
Template Predicted Secondary structure																																										.													.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
			392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.												.	.	.
Predicted Secondary structure		.																																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	M	V	G	S	P	K	R	R	E	I	G	H	G	R	L	A	K	R	G	V	L	A	V	M	P	D	M	D	K	F	P	Y	T	V	R	V	V	S	E	I	T	E	S	N	G	S	S	S	M	A	S	V	C	G	A	S	L	A	L	M	D	A	G	V	P	.	.	.	.	.	.	.	.	.	.	.	I	K	A
Query Conservation		.																																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	Q	G	R	I	G	G	R	T	H	E	I	Q	R	M	I	G	R	A	M	R	T	A	V	E	L	T	K	I	G	E	R	T	I	W	V	D	C	D	V	I	Q	A	D	G	G	T	A	T	A	A	I	T	G	A	F	V	A	V	A	D	A	I	I	K	L	H	K	E	G	I	I	E	E	T	P	I	K	D
Template Known Secondary structure		S	S	S																						B		G	G	G	S		S													S	S																								T	T	S	S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		A	V	A	G	I	A	M	G	L	V	K	E	G	D	N	Y	V	V	L	S	D	I	L	G	D	E	D	H	L	G	D	M	D	F	K	V	A	G	S	R	D	G	.	I	S	A	L	Q	M	D	I	K	I	E	G	I	T	K	E	I	M	Q	V	A	L	N	Q	A	K	G	A	R	L	H	I	L	G	V	M	E
Query Conservation																																												.
Alig confidence												.	.	.	.																													.
Template Conservation												.	.	.	.
Template Sequence		F	V	A	A	V	S	V	G	I	V	.	.	.	.	N	D	R	I	L	L	D	L	N	F	E	E	D	S	A	A	Q	V	D	M	N	V	V	G	T	G	S	G	R	L	S	E	V	H	T	M	G	E	E	Y	S	F	T	K	D	E	L	I	K	M	L	D	L	A	Q	K	G	I	N	E	L	I	E	L	Q	K
Template Known Secondary structure												.	.	.	.	T	T					S								T		S									T	T	S										S	S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		539	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	Y
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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