Job Description P05055 Confidence 98.54% Date Thu Jan 5 10:58:40 GMT 2012 Rank 96 Aligned Residues 102 % Identity 18% Template c1l2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:n utilization substance protein a; PDBTitle: crystal structure of nusa from thermotoga maritima: a2 structure-based role of the n-terminal domain Resolution 2.50 Å

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		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.				.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		E	E	T	G	T	T	I	E	I	E	D	D	G	T	V	K	I	A	A	T	D	G	E	K	A	K	H	A	I	R	R	I	E	E	I	T	A	E	.	.	.	I	E	V	G	R	V	Y	T	G	K	V	T	R	I	V	D	F	G	A	F	V	A	I	G	G	G	K	E	G	L	V	H	I	S	Q	I	A	D	K
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.																								.														.	.
Template Conservation																																																																		.														.	.
Template Sequence		S	I	V	K	K	E	L	N	V	K	N	F	G	R	I	A	A	Q	T	A	K	Q	V	L	I	Q	R	I	R	E	L	E	K	E	K	Q	F	E	K	Y	S	E	L	K	G	T	V	T	T	A	E	V	I	R	V	X	G	E	W	A	D	I	R	I	.	G	K	L	E	T	R	L	P	K	K	E	W	I	.	.
Template Known Secondary structure		B										S																															T	T	T	T	S											S	S							.	T	T							G	G	G	S		.	.
Template Predicted Secondary structure																																																																		.														.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.
		658	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.				.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		R	V	E	K	V	T	D	Y	L	Q	M	G	Q	E	V	P	V	K	V	L	E	V	D	R	Q	G	R	.	.	.	I	R	L	S	I
Query Conservation																													.	.	.
Alig confidence		.	.	.	.																								.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	P	G	E	E	I	K	A	G	D	L	V	K	V	Y	I	I	D	V	V	K	T	T	K	G	P	K	I	L	V	S	R
Template Known Secondary structure		.	.	.	.	T	T					T	T														T	T								S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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