 |
Job Description | P05055 | Confidence | 99.31% | Date | Thu Jan 5 10:58:40 GMT 2012 |
Rank | 68 | Aligned Residues | 66 |
% Identity | 33% | Template | c1kl9A_ |
PDB info |
PDB header:translation | Chain: A: PDB Molecule:eukaryotic translation initiation factor 2 subunit 1; |
PDBTitle: crystal structure of the n-terminal segment of human eukaryotic2 initiation factor 2alpha
|
Resolution | 1.90 Å |
|
 |
  |   |
619 | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | |
|
. | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | |
. | . | . | . | . | . | . | . | 690 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | V | G | R | V | Y | T | G | K | V | T | R | I | V | D | F | G | A | F | V | A | I | G | . |
. |
G | G | K | E | G | L | V | H | I | S | Q | I | A | D | K | R | V | E | K | V | T | D | Y | L | Q | M | G | Q | E | V | P | V | K | V | L | E | V | D | R | . |
Q | G | R | I | R | L | S | I | K | E | A | T | E | Q |
Query Conservation |   |
  |   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |
|
|
|
|
|
|   |   | . | . |
|
|   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |
|   | . |   |
|
|
|   |
|
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |
|   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |
|
|
|
|   |
|
|   |
|
|   |   |
|   |
|
|   |
|   |   |   |   |   |
Template Sequence |   |
P | E | V | E | D | V | V | X | V | N | V | R | S | I | A | E | X | G | A | Y | V | S | L | L | E | Y | N | N | I | E | G | X | I | L | L | S | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | R | I | G | R | N | E | C | V | V | V | I | R | V | D | K | E | K | G | Y | I | D | L | S | K | R | R | V | S | P | E |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  | T | T | T | T | T |  |  |  |  |  |  | G | G | G | . | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  | S | T | T |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
696 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
S |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
E |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
93 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|