Job Description P05055 Confidence 98.70% Date Thu Jan 5 10:58:40 GMT 2012 Rank 89 Aligned Residues 76 % Identity 29% Template c1go3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: structure of an archeal homolog of the eukaryotic rna2 polymerase ii rpb4/rpb7 complex Resolution 1.75 Å

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		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.										660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.		.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.																							.
Query SS confidence																																															.	.	.	.	.	.	.	.	.																							.
Query Sequence		I	T	A	E	I	E	V	G	R	V	Y	T	G	K	V	T	R	I	V	D	F	G	A	F	V	A	I	G	G	G	K	E	G	L	V	H	I	S	Q	I	A	D	K	R	V	.	.	.	.	.	.	.	.	.	E	K	V	T	D	Y	L	Q	M	G	Q	E	V	P	V	K	V	L	E	V	D	R	.	Q	G	R
Query Conservation																																															.	.	.	.	.	.	.	.	.																							.
Alig confidence																															.																.	.	.	.	.	.	.	.	.																							.
Template Conservation																															.
Template Sequence		L	V	Y	I	P	E	M	Y	E	L	I	E	G	E	V	V	D	V	V	E	F	G	S	F	V	R	L	G	P	.	L	D	G	L	I	H	V	S	Q	I	M	D	D	Y	V	S	Y	D	P	K	A	I	I	G	K	E	T	G	K	V	L	E	I	G	D	Y	V	R	A	R	I	V	A	I	S	L	K	A	S	K
Template Known Secondary structure								T	T												T	T							S	S	.	S						G	G	G	S		S	S												T	T	T						T	T
Template Predicted Secondary structure																															.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		685	.	.	.	.	690	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	L	S	I	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	L	T	M	R	Q
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions