Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAP3
Confidence3.37%DateThu Jan 5 11:13:25 GMT 2012
Rank64Aligned Residues45
% Identity31%Templated1trra_
SCOP infoDNA/RNA-binding 3-helical bundle TrpR-like Trp repressor, TrpR
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20......... 30.........40.........50......
Predicted Secondary structure 
.



Query SS confidence 

























.


























Query Sequence  TPEEKKKVLTRVRRIRGQIDALERSL. EGDAECRAILQQIAAVRGAANGLMAEV
Query Conservation 
   
  

 











  

.

   
 


 

 


 

      
Alig confidence 












........




.


























Template Conservation 
  
  


 
  ........
   

 
  




   



 






  
Template Sequence  TPDEREALGTRVR. . . . . . . . IVEELLRGEMSQRELKNELGAGIATITRGSNSL
Template Known Secondary structure 
........

S
T

Template Predicted Secondary structure 
........






Template SS confidence 





















































   44.....50...... ...60.........70.........80.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions