Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD53
Confidence2.82%DateThu Jan 5 11:20:02 GMT 2012
Rank67Aligned Residues67
% Identity30%Templatec2wmkB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:fucolectin-related protein; PDBTitle: crystal structure of the catalytic module of a family 982 glycoside hydrolase from streptococcus pneumoniae sp3-bs713 (sp3gh98) in complex with the a-lewisy pentasaccharide4 blood group antigen.
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.... .....100....
Predicted Secondary structure 



















...............

Query SS confidence 






















































. . . . . . . . . . . . . . .









Query Sequence  REARMGRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPH. . . . . . . . . . . . . . . GFSSRVALER
Query Conservation 






















































...............









Alig confidence 














..
















..


















...............









Template Conservation 











 

..
   
    
 


  
..
 
 

 




 

 
  
 
      
   
   

  

  
Template Sequence  KEKVLEDTKVFIHGD. . YSNKGNGKFFVNVNTDR. . EQTPLYMTGRYNVIPAIPGVLKTDRIQIKEITSPEFSSTQARKE
Template Known Secondary structure  T

S
..GGGTTGGGGTBTTTBSS..SS
S

S

TT




TTS




TTSGGGSS
Template Predicted Secondary structure 

..













..



























Template SS confidence 















































































   745....750......... 760.........770...... ...780.........790.........800.........810.........820
 
   105....110
Predicted Secondary structure 
Query SS confidence 





Query Sequence  YLNGLF
Query Conservation 





Alig confidence 





Template Conservation   

 

Template Sequence  YLNKLY
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 





   832.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions